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STRINGSTRING
ZBED6 ZBED6 MAGOH MAGOH SUGP1 SUGP1 SNX3 SNX3 ZC3H11A ZC3H11A PPIB PPIB UBC UBC PPIF PPIF RBMS1 RBMS1 RBM27 RBM27 MRPL53 MRPL53
"ZC3H11A" - zinc finger CCCH-type containing 11A in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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small nodes:
protein of unknown 3D structure
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large nodes:
some 3D structure is known or predicted
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query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
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Edges represent protein-protein associations
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Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
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[Homology]
Score
ZC3H11Azinc finger CCCH-type containing 11A (810 aa)    
Predicted Functional Partners:
MAGOH
mago-nashi homolog, proliferation-associated (Drosophila); Component of a splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of a few core proteins and several more peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Core components of the EJC, that remains bound to spliced mRNAs throughout all stages of mRNA metabolism, functions to mark the position of the exon-exon junction in the mature mR [...] (146 aa)
        score_image   score_image   0.997
RBM27
RNA binding motif protein 27 (1060 aa)
        score_image   score_image   0.917
ZBED6
zinc finger, BED-type containing 6; Transcriptional repressor which binds to the consensus sequence 5’-GCTCGC-3’ and represses transcription of IGF2. May also regulate expression of other target genes containing this consensus binding site (By similarity) (979 aa)
      score_image     score_image   0.917
RBMS1
RNA binding motif, single stranded interacting protein 1; Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5’-[AT]CT[AT][AT]T-3’. Probably has a role in DNA replication (406 aa)
        score_image       0.912
SUGP1
SURP and G patch domain containing 1; Plays a role in pre-mRNA splicing (645 aa)
        score_image       0.906
SNX3
sorting nexin 3 (162 aa)
        score_image       0.902
PPIB
peptidylprolyl isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (216 aa)
        score_image       0.901
MRPL53
mitochondrial ribosomal protein L53 (112 aa)
        score_image       0.896
UBC
ubiquitin C (685 aa)
        score_image       0.721
PPIF
peptidylprolyl isomerase F; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Involved in regulation of the mitochondrial permeability transition pore (mPTP). It is proposed that its association with the mPTP is masking a binding site for inhibiting inorganic phosphate (Pi) and promotes the open probablity of the mPTP leading to apoptosis or necrosis; the requirement of the PPIase activity for this function is debated. In cooperation with mitochondrial TP53 is involved in activating oxidative stress- i [...] (207 aa)
        score_image   score_image   0.698
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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