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STRINGSTRING
MYO5C MYO5C MYO5A MYO5A CETN1 CETN1 OBSCN OBSCN POTEE POTEE POTEI POTEI SPATA21 SPATA21 MYO1G MYO1G CAPN13 CAPN13 MYO5B MYO5B CETN3 CETN3
"SPATA21" - spermatogenesis associated 21 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
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[Homology]
Score
SPATA21spermatogenesis associated 21; Involved in the differentiation of haploid spermatids (By similarity) (469 aa)    
Predicted Functional Partners:
MYO5A
myosin VA (heavy chain 12, myoxin); Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. Involved in melanosome transport. Also mediates the transport of vesicles to the plasma membrane. May also be required for some polarization process involved in dendrite formation (1855 aa)
        score_image   score_image   0.700
MYO5B
myosin VB; May be involved in vesicular trafficking via its association with the CART complex. The CART complex is necessary for efficient transferrin receptor recycling but not for EGFR degradation. Required in a complex with RAB11A and RAB11FIP2 for the transport of NPC1L1 to the plasma membrane. Together with RAB11A participates in CFTR trafficking to the plasma membrane and TF (transferrin) recycling in nonpolarized cells. Together with RAB11A and RAB8A participates in epithelial cell polarization. Together with RAB25 regulates transcytosis (By similarity) (1848 aa)
        score_image   score_image   0.700
MYO5C
myosin VC; May be involved in transferrin trafficking. Likely to power actin-based membrane trafficking in many physiologically crucial tissues (1742 aa)
        score_image   score_image   0.700
OBSCN
obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (8678 aa)
        score_image   score_image   0.679
MYO1G
myosin IG; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (By similarity) (1018 aa)
        score_image   score_image   0.658
CETN1
centrin, EF-hand protein, 1; Plays a fundamental role in microtubule-organizing center structure and function (172 aa)
        score_image   score_image   0.647
CETN3
centrin, EF-hand protein, 3; Plays a fundamental role in microtubule-organizing center structure and function (167 aa)
        score_image   score_image   0.635
CAPN13
calpain 13; Probable non-lysosomal thiol-protease (By similarity) (669 aa)
            score_image   0.635
POTEE
POTE ankyrin domain family member E (1075 aa)
        score_image   score_image   0.628
POTEI
POTE ankyrin domain family, member I (1075 aa)
        score_image   score_image   0.628
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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