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STRINGSTRING
FER1L6 FER1L6 DYSF DYSF TSPAN31 TSPAN31 TSPAN15 TSPAN15 MYOF MYOF TSPAN18 TSPAN18 TSPAN13 TSPAN13 OTOF OTOF NME3 NME3 PGBD1 PGBD1 SIPA1 SIPA1
"TSPAN18" - tetraspanin 18 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
TSPAN18tetraspanin 18 (248 aa)    
Predicted Functional Partners:
TSPAN15
tetraspanin 15 (294 aa)
            score_image   0.702
TSPAN13
tetraspanin 13 (204 aa)
            score_image   0.639
TSPAN31
tetraspanin 31 (210 aa)
            score_image   0.614
DYSF
dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) (2119 aa)
            score_image   0.560
FER1L6
fer-1-like 6 (C. elegans) (1857 aa)
            score_image   0.560
MYOF
myoferlin (2061 aa)
            score_image   0.560
OTOF
otoferlin; Key calcium ion sensor involved in the Ca(2+)-triggered synaptic vesicle-plasma membrane fusion and in the control of neurotransmitter release at these output synapses. Interacts in a calcium-dependent manner to the presynaptic SNARE proteins at ribbon synapses of cochlear inner hair cells (IHCs) to trigger exocytosis of neurotransmitter. Also essential to synaptic exocytosis in immature outer hair cells (OHCs). May also play a role within the recycling of endosomes (By similarity) (1997 aa)
            score_image   0.560
SIPA1
signal-induced proliferation-associated 1; GTPase activator for the nuclear Ras-related regulatory proteins Rap1 and Rap2 in vitro, converting it to the putatively inactive GDP-bound state (1042 aa)
            score_image   0.542
NME3
NME/NM23 nucleoside diphosphate kinase 3; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. Probably has a role in normal hematopoiesis by inhibition of granulocyte differentiation and induction of apoptosis (169 aa)
            score_image   0.539
PGBD1
piggyBac transposable element derived 1 (809 aa)
            score_image   0.529
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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