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STRINGSTRING
BARD1 BARD1 UIMC1 UIMC1 FAM175A FAM175A SLC25A13 SLC25A13 BABAM1 BABAM1 BRE BRE FAM175B FAM175B UBC UBC BRCC3 BRCC3 SHMT1 SHMT1 SHMT2 SHMT2
"BRE" - brain and reproductive organ-expressed (TNFRSF1A modulator) in Homo sapiens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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protein of unknown 3D structure
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some 3D structure is known or predicted
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query proteins and first shell of interactors
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white nodes:
second shell of interactors
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Known Interactions
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from curated databases
experiment edge
experimentally determined
Predicted Interactions
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gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
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textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
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[Homology]
Score
BREbrain and reproductive organ-expressed (TNFRSF1A modulator) (415 aa)    
Predicted Functional Partners:
BRCC3
BRCA1/BRCA2-containing complex, subunit 3 (316 aa)
        score_image score_image score_image   0.999
BABAM1
BRISC and BRCA1 A complex member 1; Component of the BRCA1-A complex, a complex that specifically recognizes ’Lys-63’-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes ’Lys-63’-linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it is required for the complex integrity and its localization at DSBs. Probably also plays a role as a component of the BRISC complex, a multiprote [...] (329 aa)
        score_image score_image score_image   0.999
UIMC1
ubiquitin interaction motif containing 1 (719 aa)
        score_image score_image score_image   0.999
FAM175A
family with sequence similarity 175, member A; Component of the BRCA1-A complex, a complex that specifically recognizes ’Lys-63’-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). The BRCA1-A complex also possesses deubiquitinase activity that specifically removes ’Lys-63’-linked ubiquitin on histones H2A and H2AX. In the BRCA1-A complex, it acts as a central scaffold protein that assembles the various components of the BRCA1-A complex and mediates the recruitment of BRCA1 (409 aa)
        score_image score_image score_image   0.999
FAM175B
family with sequence similarity 175, member B; Component of the BRISC complex, a multiprotein complex that specifically cleaves ’Lys-63’-linked ubiquitin. May act as a central scaffold protein that assembles the various components of the BRISC complex (415 aa)
        score_image score_image score_image   0.999
SHMT1
serine hydroxymethyltransferase 1 (soluble); Interconversion of serine and glycine (By similarity) (483 aa)
        score_image   score_image   0.999
SHMT2
serine hydroxymethyltransferase 2 (mitochondrial); Contributes to the de novo mitochondrial thymidylate biosynthesis pathway. Required to prevent uracil accumulation in mtDNA. Interconversion of serine and glycine. Associates with mitochondrial DNA (504 aa)
        score_image       0.999
UBC
ubiquitin C (685 aa)
        score_image   score_image   0.991
SLC25A13
solute carrier family 25 (aspartate/glutamate carrier), member 13; Catalyzes the calcium-dependent exchange of cytoplasmic glutamate with mitochondrial aspartate across the mitochondrial inner membrane. May have a function in the urea cycle (676 aa)
        score_image       0.990
BARD1
BRCA1 associated RING domain 1; Probable E3 ubiquitin-protein ligase. The BRCA1-BARD1 heterodimer specifically mediates the formation of ’Lys-6’-linked polyubiquitin chains and coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain genomic stability. Plays a central role in the control of the cell cycle in response to DNA damage. Acts by mediating ubiquitin E3 ligase activity that is required for its tumor suppressor function. Also forms a heterodimer with CSTF1/CSTF-50 to modulate mRNA processing and RNAP I [...] (777 aa)
        score_image score_image score_image   0.982
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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