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STRINGSTRING
FAM171B FAM171B FAM19A2 FAM19A2 TMEM145 TMEM145 FAM189A1 FAM189A1 GYG1 GYG1 JPH4 JPH4 HMX2 HMX2 GYG2 GYG2 LRRC24 LRRC24 COPG1 COPG1 PGBD5 PGBD5
"JPH4" - junctophilin 4 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
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[Homology]
Score
JPH4junctophilin 4; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. JPH4 is brain- specific and appears to have an active role in certain neurons involved in motor coordination and memory (By similarity) (628 aa)    
Predicted Functional Partners:
GYG1
glycogenin 1; Self-glucosylates, via an inter-subunit mechanism, to form an oligosaccharide primer that serves as substrate for glycogen synthase (350 aa)
            score_image   0.474
HMX2
H6 family homeobox 2; Transcription factor involved in specification of neuronal cell types and which is required for inner ear and hypothalamus development (By similarity) (273 aa)
            score_image   0.462
GYG2
glycogenin 2; Self-glucosylates, via an inter-subunit mechanism, to form an oligosaccharide primer that serves as substrate for glycogen synthase (501 aa)
            score_image   0.459
LRRC24
leucine rich repeat containing 24 (513 aa)
            score_image   0.443
COPG1
coatomer protein complex, subunit gamma 1; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; t [...] (874 aa)
            score_image   0.440
TMEM145
transmembrane protein 145 (493 aa)
            score_image   0.437
PGBD5
piggyBac transposable element derived 5 (554 aa)
            score_image   0.430
FAM171B
family with sequence similarity 171, member B (826 aa)
            score_image   0.429
FAM189A1
family with sequence similarity 189, member A1 (539 aa)
            score_image   0.422
FAM19A2
family with sequence similarity 19 (chemokine (C-C motif)-like), member A2 (131 aa)
            score_image   0.420
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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