Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small nodes:
protein of unknown 3D structure
protein of unknown 3D structure
large nodes:
some 3D structure is known or predicted
some 3D structure is known or predicted
Node Color
colored nodes:
query proteins and first shell of interactors
query proteins and first shell of interactors
white nodes:
second shell of interactors
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Your Input:
|
Neighborhood |
Gene Fusion |
Cooccurence |
Coexpression |
Experiments |
Databases |
Textmining |
[Homology] |
Score |
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 | MRPL37 | mitochondrial ribosomal protein L37 (423 aa) | ||||||||||||
Predicted Functional Partners:
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 | MRPL42 | mitochondrial ribosomal protein L42 (142 aa) |
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0.961 | ||||||||
 | MRPL24 | mitochondrial ribosomal protein L24 (216 aa) |
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0.951 | |||||||||
 | MRPL44 | mitochondrial ribosomal protein L44; Component of the 39S subunit of mitochondrial ribosome (332 aa) |
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0.939 | |||||||||
 | MRPL38 | mitochondrial ribosomal protein L38 (380 aa) |
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0.932 | |||||||||
 | MRPL9 | mitochondrial ribosomal protein L9 (267 aa) |
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0.921 | ||||||||||
 | MRPL51 | mitochondrial ribosomal protein L51 (128 aa) |
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0.919 | ||||||||||
 | MRPL32 | mitochondrial ribosomal protein L32 (188 aa) |
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0.914 | |||||||||
 | MRPL39 | mitochondrial ribosomal protein L39 (353 aa) |
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0.914 | |||||||||
 | MRPL50 | mitochondrial ribosomal protein L50 (158 aa) |
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0.913 | ||||||||||
 | MRPL2 | mitochondrial ribosomal protein L2 (305 aa) |
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0.909 | ||||||||
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
Other names: H. sapiens, Homo, Homo sapiens, human, man
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