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STRINGSTRING
NBR1 NBR1 MSANTD3 MSANTD3 UBC UBC RUNDC1 RUNDC1 TMEM38B TMEM38B FSD1L FSD1L
"RUNDC1" - RUN domain containing 1 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUNDC1RUN domain containing 1; May play a role as p53/TP53 inhibitor and thus may have oncogenic activity (613 aa)    
Predicted Functional Partners:
UBC
ubiquitin C (685 aa)
        score_image       0.483
FSD1L
fibronectin type III and SPRY domain containing 1-like (530 aa)
            score_image   0.421
NBR1
neighbor of BRCA1 gene 1; Acts probably as a receptor for selective autophagosomal degradation of ubiquitinated targets (966 aa)
            score_image   0.420
TMEM38B
transmembrane protein 38B; Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores (By similarity) (291 aa)
            score_image   0.418
MSANTD3
Myb/SANT-like DNA-binding domain containing 3 (275 aa)
            score_image   0.416
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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