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STRINGSTRING
VWA2 VWA2 FAM204A FAM204A ATRNL1 ATRNL1 CACUL1 CACUL1 UBC UBC FAM160B1 FAM160B1 EXOSC1 EXOSC1 CECR2 CECR2 DENND6A DENND6A TRIT1 TRIT1 ZNF280B ZNF280B
"FAM160B1" - family with sequence similarity 160, member B1 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
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Cooccurence
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[Homology]
Score
FAM160B1family with sequence similarity 160, member B1 (765 aa)    
Predicted Functional Partners:
VWA2
von Willebrand factor A domain containing 2 (725 aa)
            score_image   0.665
CECR2
cat eye syndrome chromosome region, candidate 2; Part of the CERF (CECR2-containing-remodeling factor) complex, which facilitates the perturbation of chromatin structure in an ATP-dependent manner. May be involved through its interaction with LRPPRC in the integration of cytoskeletal network with vesicular trafficking, nucleocytosolic shuttling, transcription, chromosome remodeling and cytokinesis (1443 aa)
            score_image   0.639
EXOSC1
exosome component 1; Non-catalytic component of the RNA exosome complex which has 3’->5’ exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding ’pervasive’ transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. The R [...] (195 aa)
            score_image   0.626
ATRNL1
attractin-like 1; May play a role in melanocortin signaling pathways that regulate energy homeostasis (By similarity) (1379 aa)
            score_image   0.577
TRIT1
tRNA isopentenyltransferase 1; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 of both cytosolic and mitochondrial tRNAs, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (467 aa)
            score_image   0.553
CACUL1
CDK2-associated, cullin domain 1; Cell cycle associated protein capable of promoting cell proliferation through the activation of CDK2 at the G1/S phase transition (369 aa)
            score_image   0.487
FAM204A
family with sequence similarity 204, member A (233 aa)
            score_image   0.485
UBC
ubiquitin C (685 aa)
        score_image       0.483
ZNF280B
zinc finger protein 280B; May function as a transcription factor (543 aa)
            score_image   0.464
DENND6A
DENN/MADD domain containing 6A; Guanine nucleotide exchange factor (GEF) for RAB14. Component of an endocytic recycling pathway that is required for the control of ADAM10 transport, shedding of N-cadherin/CDH2 by ADAM9 or ADAM10 and regulation of cell-cell junctions. Required for RAB14 recruitment to recycling endosomes (608 aa)
            score_image   0.435
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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