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STRINGSTRING
PCDHA4 PCDHA4 NBEAL1 NBEAL1 POLR3C POLR3C ZYG11A ZYG11A LRRC3 LRRC3 GSE1 GSE1 UBC UBC ZNF142 ZNF142 CUL2 CUL2 UBR4 UBR4
"ZYG11A" - zyg-11 homolog A (C. elegans) in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZYG11Azyg-11 homolog A (C. elegans); Probably acts as target recruitment subunit in an E3 ubiquitin ligase complex ZYGA-CUL2-elongin BC (By similarity) (759 aa)    
Predicted Functional Partners:
POLR3C
polymerase (RNA) III (DNA directed) polypeptide C (62kD) (534 aa)
            score_image   0.630
LRRC3
leucine rich repeat containing 3 (257 aa)
            score_image   0.565
PCDHA4
protocadherin alpha 4; Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain (By similarity) (947 aa)
            score_image   0.509
GSE1
Gse1 coiled-coil protein homolog (mouse) (1217 aa)
            score_image   0.503
NBEAL1
neurobeachin-like 1 (2694 aa)
            score_image   0.489
UBC
ubiquitin C (685 aa)
        score_image       0.483
UBR4
ubiquitin protein ligase E3 component n-recognin 4 (5183 aa)
            score_image   0.477
CUL2
cullin 2; Core component of multiple cullin-RING-based ECS (ElonginB/C-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complexes, which mediate the ubiquitination of target proteins. May serve as a rigid scaffold in the complex and may contribute to catalysis through positioning of the substrate and the ubiquitin- conjugating enzyme. The E3 ubiquitin-protein ligase activity of the complex is dependent on the neddylation of the cullin subunit and is inhibited by the association of the deneddylated cullin subunit with TIP120A/CAND1 (By similarity). The functional specificity of the [...] (764 aa)
        score_image   score_image   0.439
ZNF142
zinc finger protein 142; May be involved in transcriptional regulation (1687 aa)
            score_image   0.416
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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