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STRINGSTRING
GFM1 GFM1 MRPS11 MRPS11 MRPS9 MRPS9 MRPS16 MRPS16 MRPS14 MRPS14 MRPS2 MRPS2 MRPS6 MRPS6 MRPS15 MRPS15 MRPS5 MRPS5 MRPS10 MRPS10 MRPS12 MRPS12
"MRPS16" - mitochondrial ribosomal protein S16 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPS16mitochondrial ribosomal protein S16 (137 aa)    
Predicted Functional Partners:
MRPS2
mitochondrial ribosomal protein S2 (296 aa)
      score_image score_image   score_image   0.999
MRPS9
mitochondrial ribosomal protein S9 (396 aa)
score_image     score_image score_image   score_image   0.996
MRPS10
mitochondrial ribosomal protein S10 (201 aa)
      score_image score_image   score_image   0.990
MRPS5
mitochondrial ribosomal protein S5 (430 aa)
      score_image score_image   score_image   0.988
MRPS15
mitochondrial ribosomal protein S15 (257 aa)
      score_image score_image   score_image   0.982
MRPS12
mitochondrial ribosomal protein S12 (138 aa)
      score_image score_image   score_image   0.979
MRPS6
mitochondrial ribosomal protein S6 (125 aa)
      score_image score_image   score_image   0.979
GFM1
G elongation factor, mitochondrial 1; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of m [...] (751 aa)
      score_image score_image   score_image   0.978
MRPS14
mitochondrial ribosomal protein S14 (128 aa)
      score_image score_image   score_image   0.973
MRPS11
mitochondrial ribosomal protein S11 (194 aa)
score_image     score_image score_image   score_image   0.969
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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