Full Link:
  • Version:
  • 10.0 (archived version)
STRINGSTRING
NKX3-1 NKX3-1 DICER1 DICER1 UBC UBC USP50 USP50 CKAP4 CKAP4 ZDHHC2 ZDHHC2 ADRA1D ADRA1D PLAT PLAT
"CKAP4" - cytoskeleton-associated protein 4 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKAP4cytoskeleton-associated protein 4; High-affinity epithelial cell surface receptor for APF (602 aa)    
Predicted Functional Partners:
UBC
ubiquitin C (685 aa)
        score_image       0.912
ZDHHC2
zinc finger, DHHC-type containing 2; Palmitoyltransferase specific for GAP43 and DLG4/PSD95 (By similarity) (367 aa)
            score_image   0.876
DICER1
dicer 1, ribonuclease type III; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, EIF2C2/AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre- miRNAs) to mature miRNAs and then load them onto EIF2C2/AGO2. EIF2C2/AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. Also cleaves double-stranded RNA to produce short interfering [...] (1922 aa)
            score_image   0.801
USP50
ubiquitin specific peptidase 50; Has no peptidase activity (334 aa)
        score_image       0.740
PLAT
plasminogen activator, tissue (562 aa)
        score_image   score_image   0.581
ADRA1D
adrenoceptor alpha 1D; This alpha-adrenergic receptor mediates its effect through the influx of extracellular calcium (572 aa)
        score_image       0.556
NKX3-1
NK3 homeobox 1; Transcription factor, which binds preferentially the consensus sequence 5’-TAAGT[AG]-3’ and can behave as a transcriptional repressor. Plays an important role in normal prostate development, regulating proliferation of glandular epithelium and in the formation of ducts in prostate. Acts as a tumor suppressor controlling prostate carcinogenesis, as shown by the ability to inhibit proliferation and invasion activities of PC-3 prostate cancer cells (234 aa)
        score_image       0.529
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
Server load: medium (60%)