GDPGP1 protein (Homo sapiens) - STRING network view

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Size

small nodes:
protein of unknown 3D structure

large nodes:
some 3D structure is known or predicted

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GDPGP1

GDP-D-glucose phosphorylase 1; Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells (385 aa)

Predicted Functional Partners:

GMPPB

0.672

GMPPA

0.542

L2HGDH

0.502

MPI

0.461

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GDPGP1	GMPPA	ENSP00000368405	ENSP00000315925	GDP-D-glucose phosphorylase 1; Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells	GDP-mannose pyrophosphorylase A	0.542
GDPGP1	GMPPB	ENSP00000368405	ENSP00000309092	GDP-D-glucose phosphorylase 1; Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells	GDP-mannose pyrophosphorylase B	0.672
GDPGP1	L2HGDH	ENSP00000368405	ENSP00000267436	GDP-D-glucose phosphorylase 1; Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells	L-2-hydroxyglutarate dehydrogenase	0.502
GDPGP1	MPI	ENSP00000368405	ENSP00000318318	GDP-D-glucose phosphorylase 1; Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells	mannose phosphate isomerase; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions	0.461
GMPPA	GDPGP1	ENSP00000315925	ENSP00000368405	GDP-mannose pyrophosphorylase A	GDP-D-glucose phosphorylase 1; Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells	0.542
GMPPA	GMPPB	ENSP00000315925	ENSP00000309092	GDP-mannose pyrophosphorylase A	GDP-mannose pyrophosphorylase B	0.999
GMPPA	L2HGDH	ENSP00000315925	ENSP00000267436	GDP-mannose pyrophosphorylase A	L-2-hydroxyglutarate dehydrogenase	0.412
GMPPB	GDPGP1	ENSP00000309092	ENSP00000368405	GDP-mannose pyrophosphorylase B	GDP-D-glucose phosphorylase 1; Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells	0.672
GMPPB	GMPPA	ENSP00000309092	ENSP00000315925	GDP-mannose pyrophosphorylase B	GDP-mannose pyrophosphorylase A	0.999
L2HGDH	GDPGP1	ENSP00000267436	ENSP00000368405	L-2-hydroxyglutarate dehydrogenase	GDP-D-glucose phosphorylase 1; Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells	0.502
L2HGDH	GMPPA	ENSP00000267436	ENSP00000315925	L-2-hydroxyglutarate dehydrogenase	GDP-mannose pyrophosphorylase A	0.412
MPI	GDPGP1	ENSP00000318318	ENSP00000368405	mannose phosphate isomerase; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions	GDP-D-glucose phosphorylase 1; Specific and highly efficient GDP-D-glucose phosphorylase regulating the levels of GDP-D-glucose in cells	0.461

Experiments

Neighborhood

Textmining

Cooccurrence

Databases

Fusion

Coexpression

© STRING Consortium 2017

Credits

Access

Info

About