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STRINGSTRING
TXNRD1 TXNRD1 MSRB1 MSRB1 TXNRD3 TXNRD3 SELM SELM SELK SELK SEP15 SEP15 SELT SELT SELO SELO VIMP VIMP SEPN1 SEPN1 EPT1 EPT1
"SELO" - selenoprotein O in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELOselenoprotein O (669 aa)    
Predicted Functional Partners:
SELM
selenoprotein M precursor ; May function as a thiol-disulfide oxidoreductase that participates in disulfide bond formation (By similarity) (145 aa)
            score_image   0.908
SELK
selenoprotein K (94 aa)
            score_image   0.896
SELT
selenoprotein T precursor (195 aa)
            score_image   0.828
VIMP
VCP-interacting membrane protein; Involved in the degradation process of misfolded endoplasmic reticulum (ER) luminal proteins. Participates in the transfer of misfolded proteins from the ER to the cytosol, where they are destroyed by the proteasome in a ubiquitin-dependent manner. Probably acts by serving as a linker between DERL1, which mediates the retrotranslocation of misfolded proteins into the cytosol, and the ATPase complex VCP, which mediates the translocation and ubiquitination (189 aa)
            score_image   0.812
SEPN1
selenoprotein N, 1 (590 aa)
            score_image   0.810
MSRB1
methionine sulfoxide reductase B1 (116 aa)
score_image     score_image     score_image   0.755
SEP15
15 kDa selenoprotein isoform 1 precursor ; May be involved in redox reactions associated with the formation of disulfide bonds. May contribute to the quality control of protein folding in the endoplasmic reticulum (By similarity) (162 aa)
            score_image   0.752
TXNRD3
thioredoxin reductase 3; Displays thioredoxin reductase, glutaredoxin and glutathione reductase activities. Catalyzes disulfide bond isomerization. Promotes disulfide bond formation between GPX4 and various sperm proteins and may play a role in sperm maturation by promoting formation of sperm structural components (By similarity) (698 aa)
      score_image     score_image   0.748
EPT1
ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific); Catalyzes phosphatidylethanolamine biosynthesis from CDP-ethanolamine. It thereby plays a central role in the formation and maintenance of vesicular membranes. Involved in the formation of phosphatidylethanolamine via ’Kennedy’ pathway (397 aa)
            score_image   0.700
TXNRD1
thioredoxin reductase 1 (649 aa)
      score_image     score_image   0.684
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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