Full Link:
  • Version:
  • 10.0 (archived version)
STRINGSTRING
MORN5 MORN5 LOXL2 LOXL2 RPUSD3 RPUSD3 QTRTD1 QTRTD1 TRUB2 TRUB2 RPUSD1 RPUSD1 RPUSD2 RPUSD2 THG1L THG1L GMPS GMPS TRIT1 TRIT1 THUMPD3 THUMPD3
"RPUSD3" - RNA pseudouridylate synthase domain containing 3 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD3RNA pseudouridylate synthase domain containing 3 (351 aa)    
Predicted Functional Partners:
RPUSD2
RNA pseudouridylate synthase domain containing 2 (545 aa)
            score_image   0.725
RPUSD1
RNA pseudouridylate synthase domain containing 1 (312 aa)
            score_image   0.719
TRUB2
TruB pseudouridine (psi) synthase homolog 2 (E. coli); May be responsible for synthesis of pseudouridine from uracil in transfer RNAs (By similarity) (331 aa)
            score_image   0.704
THUMPD3
THUMP domain containing 3 (507 aa)
        score_image   score_image   0.628
QTRTD1
queuine tRNA-ribosyltransferase domain containing 1; Interacts with QTRT1 to form an active queuine tRNA- ribosyltransferase. This enzyme exchanges queuine for the guanine at the wobble position of tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), thereby forming the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis-dihydroxy-2-cyclopenten-1- yl)amino)methyl)-7-deazaguanosine) (By similarity) (415 aa)
            score_image   0.610
THG1L
tRNA-histidine guanylyltransferase 1-like (S. cerevisiae); Adds a GMP to the 5’-end of tRNA(His) after transcription and RNase P cleavage. This step is essential for proper recognition of the tRNA and for the fidelity of protein synthesis (298 aa)
            score_image   0.567
MORN5
MORN repeat containing 5 (161 aa)
            score_image   0.563
TRIT1
tRNA isopentenyltransferase 1; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 of both cytosolic and mitochondrial tRNAs, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (467 aa)
      score_image     score_image   0.543
LOXL2
lysyl oxidase-like 2; Mediates the post-translational oxidative deamination of lysine residues on target proteins leading to the formation of deaminated lysine (allysine). When secreted in extracellular matrix, promotes cross-linking of extracellular matrix proteins by mediating oxidative deamination of peptidyl lysine residues in precursors to fibrous collagen and elastin. Acts as a regulator of sprouting angiogenesis, probably via collagen IV scaffolding. When nuclear, acts as a transcription corepressor and specifically mediates deamination of trimethylated ’Lys-4’ of histone H3 (H3 [...] (774 aa)
            score_image   0.483
GMPS
guanine monphosphate synthetase; Involved in the de novo synthesis of guanine nucleotides which are not only essential for DNA and RNA synthesis, but also provide GTP, which is involved in a number of cellular processes important for cell division (693 aa)
      score_image     score_image   0.481
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
Server load: low (39%)