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STRINGSTRING
SEPN1 SEPN1 SELT SELT SELM SELM SEPW1 SEPW1 GPX1 GPX1 GPX6 GPX6 SELK SELK SEP15 SEP15 C11orf31 C11orf31 SELO SELO VIMP VIMP
"SELM" - selenoprotein M precursor in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELMselenoprotein M precursor ; May function as a thiol-disulfide oxidoreductase that participates in disulfide bond formation (By similarity) (145 aa)    
Predicted Functional Partners:
SELO
selenoprotein O (669 aa)
            score_image   0.908
SELK
selenoprotein K (94 aa)
            score_image   0.841
SEPN1
selenoprotein N, 1 (590 aa)
            score_image   0.815
VIMP
VCP-interacting membrane protein; Involved in the degradation process of misfolded endoplasmic reticulum (ER) luminal proteins. Participates in the transfer of misfolded proteins from the ER to the cytosol, where they are destroyed by the proteasome in a ubiquitin-dependent manner. Probably acts by serving as a linker between DERL1, which mediates the retrotranslocation of misfolded proteins into the cytosol, and the ATPase complex VCP, which mediates the translocation and ubiquitination (189 aa)
            score_image   0.812
SEPW1
selenoprotein W, 1; Plays a role as a glutathione (GSH)-dependent antioxidant. May be involved in a redox-related process. May play a role in the myopathies of selenium deficiency (By similarity) (88 aa)
            score_image   0.804
SEP15
15 kDa selenoprotein isoform 1 precursor ; May be involved in redox reactions associated with the formation of disulfide bonds. May contribute to the quality control of protein folding in the endoplasmic reticulum (By similarity) (162 aa)
            score_image   0.754
GPX1
glutathione peroxidase 1; Protects the hemoglobin in erythrocytes from oxidative breakdown (203 aa)
            score_image   0.656
C11orf31
chromosome 11 open reading frame 31; May be involved in a redox-related process (Potential) (122 aa)
            score_image   0.650
SELT
selenoprotein T precursor (195 aa)
            score_image   0.615
GPX6
glutathione peroxidase 6 (olfactory) (221 aa)
            score_image   0.593
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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