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STRINGSTRING
RNF113B RNF113B TMCO5A TMCO5A FAM98B FAM98B ATPBD4 ATPBD4 C15orf53 C15orf53 OTUD1 OTUD1 C15orf41 C15orf41 C1orf105 C1orf105 SH3RF2 SH3RF2 LRRC3B LRRC3B
"C15orf41" - chromosome 15 open reading frame 41 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C15orf41chromosome 15 open reading frame 41 (281 aa)    
Predicted Functional Partners:
ATPBD4
ATP binding domain 4; Amidase that catalyzes the last step of diphthamide biosynthesis using ammonium and ATP. Diphthamide biosynthesis consists in the conversion of an L-histidine residue in the translation elongation factor eEF-2 (EEF2) to diphthamide (Probable) (267 aa)
            score_image   0.725
C15orf53
chromosome 15 open reading frame 53 (179 aa)
            score_image   0.624
FAM98B
family with sequence similarity 98, member B (433 aa)
            score_image   0.623
C1orf105
chromosome 1 open reading frame 105 (183 aa)
            score_image   0.570
TMCO5A
transmembrane and coiled-coil domains 5A (288 aa)
            score_image   0.564
LRRC3B
leucine rich repeat containing 3B (259 aa)
            score_image   0.472
SH3RF2
SH3 domain containing ring finger 2; Inhibits PPP1CA phosphatase activity. May be a E3 ubiquitin-protein ligase (Potential). May play a role in cardiac function (729 aa)
            score_image   0.471
RNF113B
ring finger protein 113B (322 aa)
      score_image     score_image   0.423
OTUD1
OTU domain containing 1 (481 aa)
            score_image   0.408
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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