GOLGA6B protein (Homo sapiens) - STRING network view

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Size

small nodes:
protein of unknown 3D structure

large nodes:
some 3D structure is known or predicted

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GOLGA6B

golgin A6 family, member B (693 aa)

Predicted Functional Partners:

SORBS2

0.649

RFPL4B

0.624

SORBS1

0.574

ARHGAP11B

0.504

SPATA16

0.416

NME7

0.407

Your Current Organism:

Homo sapiens

NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGAP11B	GOLGA6B	ENSP00000392760	ENSP00000408132	Rho GTPase activating protein 11B	golgin A6 family, member B	0.504
ARHGAP11B	NME7	ENSP00000392760	ENSP00000356785	Rho GTPase activating protein 11B	NME/NM23 family member 7; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	0.405
ARHGAP11B	RFPL4B	ENSP00000392760	ENSP00000423391	Rho GTPase activating protein 11B	ret finger protein-like 4B	0.623
GOLGA6B	ARHGAP11B	ENSP00000408132	ENSP00000392760	golgin A6 family, member B	Rho GTPase activating protein 11B	0.504
GOLGA6B	NME7	ENSP00000408132	ENSP00000356785	golgin A6 family, member B	NME/NM23 family member 7; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	0.407
GOLGA6B	RFPL4B	ENSP00000408132	ENSP00000423391	golgin A6 family, member B	ret finger protein-like 4B	0.624
GOLGA6B	SORBS1	ENSP00000408132	ENSP00000355136	golgin A6 family, member B	sorbin and SH3 domain containing 1	0.574
GOLGA6B	SORBS2	ENSP00000408132	ENSP00000284776	golgin A6 family, member B	sorbin and SH3 domain containing 2	0.649
GOLGA6B	SPATA16	ENSP00000408132	ENSP00000341765	golgin A6 family, member B	spermatogenesis associated 16	0.416
NME7	ARHGAP11B	ENSP00000356785	ENSP00000392760	NME/NM23 family member 7; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	Rho GTPase activating protein 11B	0.405
NME7	GOLGA6B	ENSP00000356785	ENSP00000408132	NME/NM23 family member 7; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	golgin A6 family, member B	0.407
NME7	RFPL4B	ENSP00000356785	ENSP00000423391	NME/NM23 family member 7; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	ret finger protein-like 4B	0.510
RFPL4B	ARHGAP11B	ENSP00000423391	ENSP00000392760	ret finger protein-like 4B	Rho GTPase activating protein 11B	0.623
RFPL4B	GOLGA6B	ENSP00000423391	ENSP00000408132	ret finger protein-like 4B	golgin A6 family, member B	0.624
RFPL4B	NME7	ENSP00000423391	ENSP00000356785	ret finger protein-like 4B	NME/NM23 family member 7; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate	0.510
SORBS1	GOLGA6B	ENSP00000355136	ENSP00000408132	sorbin and SH3 domain containing 1	golgin A6 family, member B	0.574
SORBS2	GOLGA6B	ENSP00000284776	ENSP00000408132	sorbin and SH3 domain containing 2	golgin A6 family, member B	0.649
SPATA16	GOLGA6B	ENSP00000341765	ENSP00000408132	spermatogenesis associated 16	golgin A6 family, member B	0.416

Experiments

Cooccurrence

Textmining

Neighborhood

Databases

Fusion

Coexpression

© STRING Consortium 2017

Credits

Access

Info

About