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STRINGSTRING
FAM149A FAM149A TBC1D3 TBC1D3 ZNF165 ZNF165 ELMOD1 ELMOD1 ZNF192 ZNF192 SMIM7 SMIM7 DLGAP2 DLGAP2 DLGAP1 DLGAP1 ODF3L2 ODF3L2 TMEM154 TMEM154 ZSCAN16 ZSCAN16
"SMIM7" - small integral membrane protein 7 in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMIM7small integral membrane protein 7 (75 aa)    
Predicted Functional Partners:
ZSCAN16
zinc finger and SCAN domain containing 16; May be involved in transcriptional regulation (348 aa)
            score_image   0.723
DLGAP1
discs, large (Drosophila) homolog-associated protein 1 (977 aa)
            score_image   0.663
ZNF192
zinc finger protein 192; May be involved in transcriptional regulation (578 aa)
            score_image   0.648
ZNF165
zinc finger protein 165; May be involved in transcriptional regulation (485 aa)
            score_image   0.583
ODF3L2
outer dense fiber of sperm tails 3-like 2 (289 aa)
            score_image   0.565
DLGAP2
discs, large (Drosophila) homolog-associated protein 2; May play a role in the molecular organization of synapses and neuronal cell signaling. Could be an adapter protein linking ion channel to the subsynaptic cytoskeleton. May induce enrichment of PSD-95/SAP90 at the plasma membrane (975 aa)
            score_image   0.549
TMEM154
transmembrane protein 154 (183 aa)
            score_image   0.499
FAM149A
family with sequence similarity 149, member A (482 aa)
            score_image   0.459
TBC1D3
TBC1 domain family, member 3; Acts as a GTPase activating protein for RAB5. Does not act on RAB4 or RAB11 (549 aa)
            score_image   0.418
ELMOD1
ELMO/CED-12 domain containing 1; Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family (334 aa)
            score_image   0.414
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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