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STRINGSTRING
CDC20B CDC20B ASH1L ASH1L LRTM1 LRTM1 PANK3 PANK3 ENSG00000161939 ENSG00000161939 SRSF5 SRSF5 SETD4 SETD4
"ENSG00000161939" - RNASEK-C17orf49 readthrough (non-protein coding) in Homo sapiens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Size
small protein node
small nodes:
protein of unknown 3D structure
large protein node
large nodes:
some 3D structure is known or predicted
Node Color
colored protein node
colored nodes:
query proteins and first shell of interactors
non-colored protein node
white nodes:
second shell of interactors
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
database edge
from curated databases
experiment edge
experimentally determined
Predicted Interactions
neighborhood edge
gene neighborhood
fusion edge
gene fusions
cooccurrence edge
gene co-occurrence
Others
textmining edge
textmining
coexpression edge
co-expression
homology edge
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSG00000161939RNASEK-C17orf49 readthrough (non-protein coding) (233 aa)    
Predicted Functional Partners:
LRTM1
leucine-rich repeats and transmembrane domains 1 (345 aa)
            score_image   0.774
SRSF5
serine/arginine-rich splicing factor 5; Plays a role in constitutive splicing and can modulate the selection of alternative splice sites (272 aa)
            score_image   0.707
CDC20B
cell division cycle 20 homolog B (S. cerevisiae) (519 aa)
            score_image   0.597
SETD4
SET domain containing 4 (440 aa)
            score_image   0.560
PANK3
pantothenate kinase 3; Plays a role in the physiological regulation of the intracellular CoA concentration (By similarity) (370 aa)
            score_image   0.462
ASH1L
ash1 (absent, small, or homeotic)-like (Drosophila); Histone methyltransferase specifically methylating ’Lys- 36’ of histone H3 (H3K36me) (2964 aa)
            score_image   0.412
Your Current Organism:
Homo sapiens
NCBI taxonomy Id: 9606
Other names: H. sapiens, Homo, Homo sapiens, human, man
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