Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX28 | KIAA0391 | ENSP00000332340 | ENSP00000454657 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28; May be involved in RNA processing or transport. Has RNA and Mg(2+)-dependent ATPase activity | KIAA0391 | 0.578 |
DDX28 | METTL17 | ENSP00000332340 | ENSP00000372445 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28; May be involved in RNA processing or transport. Has RNA and Mg(2+)-dependent ATPase activity | methyltransferase like 17; May be a component of the mitochondrial small ribosomal subunit (By similarity) | 0.666 |
DDX28 | PTCD3 | ENSP00000332340 | ENSP00000254630 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28; May be involved in RNA processing or transport. Has RNA and Mg(2+)-dependent ATPase activity | pentatricopeptide repeat domain 3; Mitochondrial RNA-binding protein that has a role in mitochondrial translation | 0.443 |
ENSG00000248919 | KIAA0391 | ENSP00000400168 | ENSP00000454657 | ATP5J2-PTCD1 readthrough | KIAA0391 | 0.851 |
ENSG00000248919 | POLRMT | ENSP00000400168 | ENSP00000215591 | ATP5J2-PTCD1 readthrough | polymerase (RNA) mitochondrial (DNA directed); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) | 0.759 |
ENSG00000248919 | PTCD2 | ENSP00000400168 | ENSP00000308948 | ATP5J2-PTCD1 readthrough | pentatricopeptide repeat domain 2; Involved in mitochondrial RNA maturation and mitochondrial respiratory chain function (By similarity) | 0.843 |
ENSG00000248919 | PTCD3 | ENSP00000400168 | ENSP00000254630 | ATP5J2-PTCD1 readthrough | pentatricopeptide repeat domain 3; Mitochondrial RNA-binding protein that has a role in mitochondrial translation | 0.744 |
ENSG00000248919 | TRMT10C | ENSP00000400168 | ENSP00000312356 | ATP5J2-PTCD1 readthrough | tRNA methyltransferase 10 homolog C (S. cerevisiae); Functions in mitochondrial tRNA maturation. Part of mitochondrial ribonuclease P, an enzyme composed of MRPP1/RG9MTD1, MRPP2/HSD17B10 and MRPP3/KIAA0391, which cleaves tRNA molecules in their 5’-ends | 0.892 |
KIAA0391 | DDX28 | ENSP00000454657 | ENSP00000332340 | KIAA0391 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28; May be involved in RNA processing or transport. Has RNA and Mg(2+)-dependent ATPase activity | 0.578 |
KIAA0391 | ENSG00000248919 | ENSP00000454657 | ENSP00000400168 | KIAA0391 | ATP5J2-PTCD1 readthrough | 0.851 |
KIAA0391 | METTL17 | ENSP00000454657 | ENSP00000372445 | KIAA0391 | methyltransferase like 17; May be a component of the mitochondrial small ribosomal subunit (By similarity) | 0.598 |
KIAA0391 | NPAS3 | ENSP00000454657 | ENSP00000348460 | KIAA0391 | neuronal PAS domain protein 3; May play a broad role in neurogenesis. May control regulatory pathways relevant to schizophrenia and to psychotic illness (By similarity) | 0.752 |
KIAA0391 | POLRMT | ENSP00000454657 | ENSP00000215591 | KIAA0391 | polymerase (RNA) mitochondrial (DNA directed); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) | 0.569 |
KIAA0391 | PTCD1 | ENSP00000454657 | ENSP00000450995 | KIAA0391 | pentatricopeptide repeat domain 1; Mitochondrial protein implicated in negative regulation of leucine tRNA levels, as well as negative regulation of mitochondria-encoded proteins and COX activity. Affects also the 3’ processing of mitochondrial tRNAs | 0.780 |
KIAA0391 | PTCD2 | ENSP00000454657 | ENSP00000308948 | KIAA0391 | pentatricopeptide repeat domain 2; Involved in mitochondrial RNA maturation and mitochondrial respiratory chain function (By similarity) | 0.711 |
KIAA0391 | PTCD3 | ENSP00000454657 | ENSP00000254630 | KIAA0391 | pentatricopeptide repeat domain 3; Mitochondrial RNA-binding protein that has a role in mitochondrial translation | 0.623 |
KIAA0391 | TRMT10C | ENSP00000454657 | ENSP00000312356 | KIAA0391 | tRNA methyltransferase 10 homolog C (S. cerevisiae); Functions in mitochondrial tRNA maturation. Part of mitochondrial ribonuclease P, an enzyme composed of MRPP1/RG9MTD1, MRPP2/HSD17B10 and MRPP3/KIAA0391, which cleaves tRNA molecules in their 5’-ends | 0.942 |
KIAA0391 | UBC | ENSP00000454657 | ENSP00000344818 | KIAA0391 | ubiquitin C | 0.620 |
METTL17 | DDX28 | ENSP00000372445 | ENSP00000332340 | methyltransferase like 17; May be a component of the mitochondrial small ribosomal subunit (By similarity) | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28; May be involved in RNA processing or transport. Has RNA and Mg(2+)-dependent ATPase activity | 0.666 |
METTL17 | KIAA0391 | ENSP00000372445 | ENSP00000454657 | methyltransferase like 17; May be a component of the mitochondrial small ribosomal subunit (By similarity) | KIAA0391 | 0.598 |
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