STRING 9.05 
  SNRPA protein (Homo sapiens) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
SNRPA
small nuclear ribonucleoprotein polypeptide A; Binds stem loop II of U1 snRNA. It is the first snRNP to interact with pre-mRNA. This interaction is required for the subsequent binding of U2 snRNP and the U4/U6/U5 tri-snRNP. In a snRNP-free form (SF-A) may be involved in coupled pre-mRNA splicing and polyadenylation process (282 aa)
(Homo sapiens)
Predicted Functional Partners:
PTBP1
polypyrimidine tract binding protein 1; Plays a role in pre-mRNA splicing. Binds to the polypyr [...] (557 aa)
    0.999
U2AF2
U2 small nuclear RNA auxiliary factor 2; Necessary for the splicing of pre-mRNA. Binds to the p [...] (475 aa)
    0.999
C19orf43
Uncharacterized protein C19orf43 (176 aa)
       0.999
SNRPA1
small nuclear ribonucleoprotein polypeptide A'; This protein is associated with sn-RNP U2. It h [...] (255 aa)
    0.998
HNRNPK
microRNA 7-1; One of the major pre-mRNA-binding proteins. Binds tenaciously to poly(C) sequence [...] (464 aa)
     0.997
SNRNP70
small nuclear ribonucleoprotein 70kDa (U1); Mediates the splicing of pre-mRNA by binding to the [...] (437 aa)
    0.996
SF3A2
splicing factor 3a, subunit 2, 66kDa; Subunit of the splicing factor SF3A required for 'A' comp [...] (464 aa)
    0.996
SNRPD2
small nuclear ribonucleoprotein D2 polypeptide 16.5kDa; Required for pre-mRNA splicing. Require [...] (118 aa)
    0.992
SNRPD3
small nuclear ribonucleoprotein D3 polypeptide 18kDa; Appears to function in the U7 snRNP compl [...] (126 aa)
    0.992
SNRPG
small nuclear ribonucleoprotein polypeptide G; Appears to function in the U7 snRNP complex that [...] (76 aa)
    0.992
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
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Co-expression Experiments Databases Textmining
 
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