STRING 9.05 
  MATR3 protein (Homo sapiens) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
MATR3
matrin 3; May play a role in transcription or may interact with other nuclear matrix proteins to form the internal fibrogranular network. In association with the SFPQ-NONO heteromer may play a role in nuclear retention of defective RNAs (847 aa)
(Homo sapiens)
Predicted Functional Partners:
PTBP2
polypyrimidine tract binding protein 2; RNA-binding protein which binds to intronic polypyrimid [...] (531 aa)
     0.999
DDX5
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5; RNA-dependent ATPase activity. The rate of ATP hydrol [...] (614 aa)
      0.876
UBC
ubiquitin C (685 aa)
       0.727
HNRNPK
microRNA 7-1; One of the major pre-mRNA-binding proteins. Binds tenaciously to poly(C) sequence [...] (464 aa)
     0.659
TTF2
transcription termination factor, RNA polymerase II; DsDNA-dependent ATPase which acts as a tra [...] (1162 aa)
       0.621
MLL2
myeloid/lymphoid or mixed-lineage leukemia 2; Histone methyltransferase. Methylates 'Lys-4' of [...] (5537 aa)
      0.614
KDM6A
lysine (K)-specific demethylase 6A; Histone demethylase that specifically demethylates 'Lys- 27 [...] (1401 aa)
      0.597
PCBP1
poly(rC) binding protein 1; Single-stranded nucleic acid binding protein that binds preferentia [...] (356 aa)
      0.585
PAXIP1
PAX interacting (with transcription-activation domain) protein 1; Functions as a key component [...] (1069 aa)
       0.583
CDK9
cyclin-dependent kinase 9; Member of the cyclin-dependent kinase pair (CDK9/cyclin- T) complex, [...] (372 aa)
      0.581
 
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Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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