Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atu0214 | ggt | Atu0214 | Atu4722 | Leucine aminopeptidase; Belongs to the peptidase M17 family. | Gamma-glutamyltranspeptidase. | 0.913 |
Atu0214 | gsh1 | Atu0214 | Atu0656 | Leucine aminopeptidase; Belongs to the peptidase M17 family. | Glutamate-cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily. | 0.900 |
Atu0214 | gshB | Atu0214 | Atu0310 | Leucine aminopeptidase; Belongs to the peptidase M17 family. | Glutathione synthetase. | 0.918 |
Atu0214 | pepA | Atu0214 | Atu1110 | Leucine aminopeptidase; Belongs to the peptidase M17 family. | Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.919 |
Atu0293 | Atu3701 | Atu0293 | Atu3701 | Glutathione S-transferase. | Glutathione S-transferase. | 0.900 |
Atu0293 | ggt | Atu0293 | Atu4722 | Glutathione S-transferase. | Gamma-glutamyltranspeptidase. | 0.905 |
Atu0293 | gor | Atu0293 | Atu1611 | Glutathione S-transferase. | Glutathione reductase; Maintains high levels of reduced glutathione. | 0.917 |
Atu0293 | gshB | Atu0293 | Atu0310 | Glutathione S-transferase. | Glutathione synthetase. | 0.923 |
Atu0293 | gst | Atu0293 | Atu0835 | Glutathione S-transferase. | Glutathione S-transferase. | 0.900 |
Atu0293 | gst-2 | Atu0293 | Atu0836 | Glutathione S-transferase. | Glutathione-S-transferase; Belongs to the GST superfamily. | 0.900 |
Atu0293 | gst-3 | Atu0293 | Atu1871 | Glutathione S-transferase. | Glutathione S-transferase. | 0.900 |
Atu3701 | Atu0293 | Atu3701 | Atu0293 | Glutathione S-transferase. | Glutathione S-transferase. | 0.900 |
Atu3701 | ggt | Atu3701 | Atu4722 | Glutathione S-transferase. | Gamma-glutamyltranspeptidase. | 0.905 |
Atu3701 | gor | Atu3701 | Atu1611 | Glutathione S-transferase. | Glutathione reductase; Maintains high levels of reduced glutathione. | 0.910 |
Atu3701 | gshB | Atu3701 | Atu0310 | Glutathione S-transferase. | Glutathione synthetase. | 0.914 |
Atu3701 | gst | Atu3701 | Atu0835 | Glutathione S-transferase. | Glutathione S-transferase. | 0.927 |
Atu3701 | gst-2 | Atu3701 | Atu0836 | Glutathione S-transferase. | Glutathione-S-transferase; Belongs to the GST superfamily. | 0.914 |
Atu3701 | gst-3 | Atu3701 | Atu1871 | Glutathione S-transferase. | Glutathione S-transferase. | 0.927 |
ggt | Atu0214 | Atu4722 | Atu0214 | Gamma-glutamyltranspeptidase. | Leucine aminopeptidase; Belongs to the peptidase M17 family. | 0.913 |
ggt | Atu0293 | Atu4722 | Atu0293 | Gamma-glutamyltranspeptidase. | Glutathione S-transferase. | 0.905 |
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