Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CC_0377 | sfsA | CC_0377 | CC_2675 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family. | 0.935 |
| CC_2674 | CC_2676 | CC_2674 | CC_2676 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.414 |
| CC_2674 | sfsA | CC_2674 | CC_2675 | Conserved hypothetical protein; Identified by Glimmer2; putative. | Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family. | 0.567 |
| CC_2676 | CC_2674 | CC_2676 | CC_2674 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.414 |
| CC_2676 | map | CC_2676 | CC_2677 | Hypothetical protein; Identified by Glimmer2; putative. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.473 |
| CC_2676 | sfsA | CC_2676 | CC_2675 | Hypothetical protein; Identified by Glimmer2; putative. | Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family. | 0.596 |
| map | CC_2676 | CC_2677 | CC_2676 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Hypothetical protein; Identified by Glimmer2; putative. | 0.473 |
| map | prfA | CC_2677 | CC_0856 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.467 |
| map | sfsA | CC_2677 | CC_2675 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family. | 0.836 |
| prfA | map | CC_0856 | CC_2677 | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.467 |
| prfA | sfsA | CC_0856 | CC_2675 | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family. | 0.564 |
| sfsA | CC_0377 | CC_2675 | CC_0377 | Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.935 |
| sfsA | CC_2674 | CC_2675 | CC_2674 | Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family. | Conserved hypothetical protein; Identified by Glimmer2; putative. | 0.567 |
| sfsA | CC_2676 | CC_2675 | CC_2676 | Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.596 |
| sfsA | map | CC_2675 | CC_2677 | Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.836 |
| sfsA | prfA | CC_2675 | CC_0856 | Sugar fermentation stimulation protein; Identified by match to TIGR protein family HMM TIGR00230; Belongs to the SfsA family. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.564 |