STRINGSTRING
panD panD panC panC panC2 panC2 panB panB betB betB xylC xylC gabT gabT Cgl2441 Cgl2441 ansA ansA aspA aspA purA purA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
panDASPARTATE 1-DECARBOXYLASE; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (136 aa)    
Predicted Functional Partners:
panC
PANTOATE--BETA-ALANINE LIGASE PROTEIN; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
 
 0.999
panC2
SIMILAR TO PANTOTHENATE SYNTHETASE.
 
 
 0.997
panB
3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
 
  
 0.967
betB
PUTATIVE BETAINE ALDEHYDE DEHYDROGENASE (BADH) OXIDOREDUCTASE.
   
 
 0.908
xylC
BENZALDEHYDE DEHYDROGENASE; Belongs to the aldehyde dehydrogenase family.
     
 0.908
gabT
PROBABLE 4-AMINOBUTYRATE AMINOTRANSFERASE PROTEIN; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.907
Cgl2441
Aminotransferase class-III, pyridoxal-phosphate dependent; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.907
ansA
L-ASPARAGINASE.
     
 0.841
aspA
ASPARTATE AMMONIA-LYASE (ASPARTASE).
   
 
 0.819
purA
ADENYLOSUCCINATE SYNTHETASE; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.809
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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