node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sde_1336 | Sde_1339 | Sde_1336 | Sde_1339 | Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Protein of unknown function DUF709. | 0.774 |
Sde_1336 | Sde_1340 | Sde_1336 | Sde_1340 | Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Uncharacterised conserved protein UCP006173; Belongs to the UPF0260 family. | 0.770 |
Sde_1336 | dnaX | Sde_1336 | Sde_1335 | Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.958 |
Sde_1336 | recR | Sde_1336 | Sde_1337 | Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.993 |
Sde_1336 | rnd | Sde_1336 | Sde_1338 | Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.800 |
Sde_1339 | Sde_1336 | Sde_1339 | Sde_1336 | Protein of unknown function DUF709. | Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.774 |
Sde_1339 | Sde_1340 | Sde_1339 | Sde_1340 | Protein of unknown function DUF709. | Uncharacterised conserved protein UCP006173; Belongs to the UPF0260 family. | 0.860 |
Sde_1339 | dnaX | Sde_1339 | Sde_1335 | Protein of unknown function DUF709. | DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.726 |
Sde_1339 | recF | Sde_1339 | Sde_0003 | Protein of unknown function DUF709. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | 0.513 |
Sde_1339 | recR | Sde_1339 | Sde_1337 | Protein of unknown function DUF709. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.860 |
Sde_1339 | rnd | Sde_1339 | Sde_1338 | Protein of unknown function DUF709. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.929 |
Sde_1340 | Sde_1336 | Sde_1340 | Sde_1336 | Uncharacterised conserved protein UCP006173; Belongs to the UPF0260 family. | Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.770 |
Sde_1340 | Sde_1339 | Sde_1340 | Sde_1339 | Uncharacterised conserved protein UCP006173; Belongs to the UPF0260 family. | Protein of unknown function DUF709. | 0.860 |
Sde_1340 | dnaX | Sde_1340 | Sde_1335 | Uncharacterised conserved protein UCP006173; Belongs to the UPF0260 family. | DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.679 |
Sde_1340 | recF | Sde_1340 | Sde_0003 | Uncharacterised conserved protein UCP006173; Belongs to the UPF0260 family. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | 0.418 |
Sde_1340 | recR | Sde_1340 | Sde_1337 | Uncharacterised conserved protein UCP006173; Belongs to the UPF0260 family. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.830 |
Sde_1340 | rnd | Sde_1340 | Sde_1338 | Uncharacterised conserved protein UCP006173; Belongs to the UPF0260 family. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.886 |
Sde_1652 | dnaX | Sde_1652 | Sde_1335 | DNA polymerase III, delta prime subunit. | DNA polymerase III, gamma subunit / DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.993 |
Sde_1652 | recR | Sde_1652 | Sde_1337 | DNA polymerase III, delta prime subunit. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.691 |
Sde_1652 | tmk | Sde_1652 | Sde_1634 | DNA polymerase III, delta prime subunit. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.906 |