node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dinG | rapA | Sde_2381 | Sde_1680 | Helicase c2; DNA-dependent ATPase and 5'-3' DNA helicase. | Helicase-like protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.823 |
dinG | rpoA | Sde_2381 | Sde_0984 | Helicase c2; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.958 |
dinG | rpoB | Sde_2381 | Sde_0924 | Helicase c2; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.956 |
dinG | rpoC | Sde_2381 | Sde_0925 | Helicase c2; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA-directed RNA polymerase, subunit beta-prime; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.814 |
dinG | rpoZ | Sde_2381 | Sde_3696 | Helicase c2; DNA-dependent ATPase and 5'-3' DNA helicase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.958 |
gmk | nusA | Sde_3695 | Sde_2709 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.423 |
gmk | rapA | Sde_3695 | Sde_1680 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Helicase-like protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.509 |
gmk | rpoZ | Sde_3695 | Sde_3696 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.972 |
nusA | gmk | Sde_2709 | Sde_3695 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.423 |
nusA | rplF | Sde_2709 | Sde_0974 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.930 |
nusA | rpoA | Sde_2709 | Sde_0984 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
nusA | rpoB | Sde_2709 | Sde_0924 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
nusA | rpoC | Sde_2709 | Sde_0925 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, subunit beta-prime; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.984 |
nusA | rpoD | Sde_2709 | Sde_0716 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | RNA polymerase sigma factor RpoD-like protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.899 |
nusA | rpoZ | Sde_2709 | Sde_3696 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.924 |
nusA | rpsB | Sde_2709 | Sde_2597 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.967 |
rapA | dinG | Sde_1680 | Sde_2381 | Helicase-like protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | Helicase c2; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.823 |
rapA | gmk | Sde_1680 | Sde_3695 | Helicase-like protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.509 |
rapA | rpoA | Sde_1680 | Sde_0984 | Helicase-like protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.967 |
rapA | rpoB | Sde_1680 | Sde_0924 | Helicase-like protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.967 |