Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OEOE_1068 | OEOE_1287 | OEOE_1068 | OEOE_1287 | L-alanine-DL-glutamate epimerase-like enzyme of enolase superfamily. | Metal-dependent hydrolase of the beta-lactamase superfamily I; Belongs to the UPF0173 family. | 0.402 |
| OEOE_1286 | OEOE_1287 | OEOE_1286 | OEOE_1287 | Phosphoesterase, DHH family protein. | Metal-dependent hydrolase of the beta-lactamase superfamily I; Belongs to the UPF0173 family. | 0.809 |
| OEOE_1286 | OEOE_1288 | OEOE_1286 | OEOE_1288 | Phosphoesterase, DHH family protein. | Protein translocase subunit yajC. | 0.729 |
| OEOE_1286 | cshB | OEOE_1286 | OEOE_1285 | Phosphoesterase, DHH family protein. | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | 0.613 |
| OEOE_1286 | tgt | OEOE_1286 | OEOE_1289 | Phosphoesterase, DHH family protein. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.651 |
| OEOE_1287 | OEOE_1068 | OEOE_1287 | OEOE_1068 | Metal-dependent hydrolase of the beta-lactamase superfamily I; Belongs to the UPF0173 family. | L-alanine-DL-glutamate epimerase-like enzyme of enolase superfamily. | 0.402 |
| OEOE_1287 | OEOE_1286 | OEOE_1287 | OEOE_1286 | Metal-dependent hydrolase of the beta-lactamase superfamily I; Belongs to the UPF0173 family. | Phosphoesterase, DHH family protein. | 0.809 |
| OEOE_1287 | OEOE_1288 | OEOE_1287 | OEOE_1288 | Metal-dependent hydrolase of the beta-lactamase superfamily I; Belongs to the UPF0173 family. | Protein translocase subunit yajC. | 0.667 |
| OEOE_1287 | cshB | OEOE_1287 | OEOE_1285 | Metal-dependent hydrolase of the beta-lactamase superfamily I; Belongs to the UPF0173 family. | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | 0.542 |
| OEOE_1287 | tgt | OEOE_1287 | OEOE_1289 | Metal-dependent hydrolase of the beta-lactamase superfamily I; Belongs to the UPF0173 family. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.555 |
| OEOE_1288 | OEOE_1286 | OEOE_1288 | OEOE_1286 | Protein translocase subunit yajC. | Phosphoesterase, DHH family protein. | 0.729 |
| OEOE_1288 | OEOE_1287 | OEOE_1288 | OEOE_1287 | Protein translocase subunit yajC. | Metal-dependent hydrolase of the beta-lactamase superfamily I; Belongs to the UPF0173 family. | 0.667 |
| OEOE_1288 | cshB | OEOE_1288 | OEOE_1285 | Protein translocase subunit yajC. | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | 0.483 |
| OEOE_1288 | tgt | OEOE_1288 | OEOE_1289 | Protein translocase subunit yajC. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.810 |
| cshB | OEOE_1286 | OEOE_1285 | OEOE_1286 | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | Phosphoesterase, DHH family protein. | 0.613 |
| cshB | OEOE_1287 | OEOE_1285 | OEOE_1287 | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | Metal-dependent hydrolase of the beta-lactamase superfamily I; Belongs to the UPF0173 family. | 0.542 |
| cshB | OEOE_1288 | OEOE_1285 | OEOE_1288 | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | Protein translocase subunit yajC. | 0.483 |
| cshB | tgt | OEOE_1285 | OEOE_1289 | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | 0.479 |
| tgt | OEOE_1286 | OEOE_1289 | OEOE_1286 | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | Phosphoesterase, DHH family protein. | 0.651 |
| tgt | OEOE_1287 | OEOE_1289 | OEOE_1287 | tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] | Metal-dependent hydrolase of the beta-lactamase superfamily I; Belongs to the UPF0173 family. | 0.555 |
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