Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RSc2206 | RSc3054 | RSc2206 | RSc3054 | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | Hypothetical protein of unknown function duf1415. | 0.416 |
RSc2206 | dnaE1 | RSc2206 | RSc2205 | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | Probable dna polymerase III (alpha chain) protein. | 0.545 |
RSc2206 | gstO | RSc2206 | RSp1310 | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | Probable glutathione-s-transferase protein. | 0.529 |
RSc2206 | gstP | RSc2206 | RSp1341 | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | Probable glutathione s-transferase protein. | 0.529 |
RSc2206 | rluC | RSc2206 | RSc1041 | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | Probable ribosomal large subunit pseudouridine synthase c protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.517 |
RSc2206 | rluD | RSc2206 | RSc1628 | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | Probable ribosomal large subunit pseudouridine synthase d protein; Responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RluA family. | 0.519 |
RSc3054 | RSc2206 | RSc3054 | RSc2206 | Hypothetical protein of unknown function duf1415. | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | 0.416 |
dnaE1 | RSc2206 | RSc2205 | RSc2206 | Probable dna polymerase III (alpha chain) protein. | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | 0.545 |
gstO | RSc2206 | RSp1310 | RSc2206 | Probable glutathione-s-transferase protein. | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | 0.529 |
gstP | RSc2206 | RSp1341 | RSc2206 | Probable glutathione s-transferase protein. | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | 0.529 |
rluC | RSc2206 | RSc1041 | RSc2206 | Probable ribosomal large subunit pseudouridine synthase c protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | 0.517 |
rluD | RSc2206 | RSc1628 | RSc2206 | Probable ribosomal large subunit pseudouridine synthase d protein; Responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; Belongs to the pseudouridine synthase RluA family. | Putative predicted sulfurtransferase protein; Belongs to the UPF0176 family. | 0.519 |