STRINGSTRING
ecfA2 ecfA2 ecfA1 ecfA1 ecfT ecfT LBA1940 LBA1940 LBA0920 LBA0920 LBA0093 LBA0093 truA truA LBA1585 LBA1585 LBA1783 LBA1783 LBA0597 LBA0597 rpsI rpsI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfA2ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (285 aa)    
Predicted Functional Partners:
ecfA1
ABC transporter ATP binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
0.999
ecfT
ABC transporter permease; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.999
LBA1940
COG4684 Predicted membrane protein.
   
 
 0.985
LBA0920
ABC transporter permease protein.
 
 0.975
LBA0093
Putative ABC transporter permease component.
  
 0.963
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.933
LBA1585
ABC transporter ATP-binding protein.
  
0.851
LBA1783
ABC transporter ATP-binding protein.
    
0.844
LBA0597
Multidrug resistance ABC transporter ATP binding protein.
     
0.824
rpsI
COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
 
  
 0.814
Your Current Organism:
Lactobacillus acidophilus
NCBI taxonomy Id: 272621
Other names: L. acidophilus NCFM, Lactobacillus acidophilus NCFM, Lactobacillus acidophilus str. NCFM, Lactobacillus acidophilus strain NCFM
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