Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Jann_0028 | Jann_0363 | Jann_0028 | Jann_0363 | Aromatic amino acid aminotransferase apoenzyme. | Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase. | 0.907 |
Jann_0028 | Jann_1035 | Jann_0028 | Jann_1035 | Aromatic amino acid aminotransferase apoenzyme. | Prephenate dehydrogenase. | 0.912 |
Jann_0028 | Jann_2654 | Jann_0028 | Jann_2654 | Aromatic amino acid aminotransferase apoenzyme. | Aminotransferase. | 0.917 |
Jann_0028 | Jann_3260 | Jann_0028 | Jann_3260 | Aromatic amino acid aminotransferase apoenzyme. | 4-hydroxyphenylpyruvate dioxygenase. | 0.949 |
Jann_0028 | Jann_3473 | Jann_0028 | Jann_3473 | Aromatic amino acid aminotransferase apoenzyme. | Aminotransferase. | 0.915 |
Jann_0028 | Jann_3865 | Jann_0028 | Jann_3865 | Aromatic amino acid aminotransferase apoenzyme. | Prephenate dehydratase. | 0.937 |
Jann_0028 | hisC | Jann_0028 | Jann_1034 | Aromatic amino acid aminotransferase apoenzyme. | Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.915 |
Jann_0028 | katG | Jann_0028 | Jann_1586 | Aromatic amino acid aminotransferase apoenzyme. | Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.908 |
Jann_0363 | Jann_0028 | Jann_0363 | Jann_0028 | Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase. | Aromatic amino acid aminotransferase apoenzyme. | 0.907 |
Jann_0363 | Jann_2654 | Jann_0363 | Jann_2654 | Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase. | Aminotransferase. | 0.911 |
Jann_0363 | Jann_3260 | Jann_0363 | Jann_3260 | Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.903 |
Jann_0363 | Jann_3473 | Jann_0363 | Jann_3473 | Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase. | Aminotransferase. | 0.915 |
Jann_0363 | hisC | Jann_0363 | Jann_1034 | Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase. | Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.915 |
Jann_1035 | Jann_0028 | Jann_1035 | Jann_0028 | Prephenate dehydrogenase. | Aromatic amino acid aminotransferase apoenzyme. | 0.912 |
Jann_1035 | Jann_2654 | Jann_1035 | Jann_2654 | Prephenate dehydrogenase. | Aminotransferase. | 0.905 |
Jann_1035 | Jann_3473 | Jann_1035 | Jann_3473 | Prephenate dehydrogenase. | Aminotransferase. | 0.956 |
Jann_1035 | Jann_3865 | Jann_1035 | Jann_3865 | Prephenate dehydrogenase. | Prephenate dehydratase. | 0.968 |
Jann_1035 | hisC | Jann_1035 | Jann_1034 | Prephenate dehydrogenase. | Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.989 |
Jann_2654 | Jann_0028 | Jann_2654 | Jann_0028 | Aminotransferase. | Aromatic amino acid aminotransferase apoenzyme. | 0.917 |
Jann_2654 | Jann_0363 | Jann_2654 | Jann_0363 | Aminotransferase. | Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase. | 0.911 |
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