Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACO79565.1 | purC | Avin_34160 | Avin_35320 | Colicin V production protein. | SAICAR synthetase. | 0.880 |
ACO79565.1 | purD | Avin_34160 | Avin_06880 | Colicin V production protein. | Phosphoribosylglycinamide synthetase; Belongs to the GARS family. | 0.573 |
ACO79565.1 | purE | Avin_34160 | Avin_01190 | Colicin V production protein. | 1-(5-Phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.800 |
ACO79565.1 | purF | Avin_34160 | Avin_34150 | Colicin V production protein. | Amidophosphoribosyl transferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.974 |
ACO79565.1 | purH | Avin_34160 | Avin_06890 | Colicin V production protein. | Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.580 |
ACO79565.1 | purK | Avin_34160 | Avin_01200 | Colicin V production protein. | Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.569 |
ACO79565.1 | purL | Avin_34160 | Avin_39660 | Colicin V production protein. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.984 |
ACO79565.1 | purM | Avin_34160 | Avin_36890 | Colicin V production protein. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.888 |
ACO79565.1 | purN | Avin_34160 | Avin_36900 | Colicin V production protein. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.601 |
ACO79565.1 | purT | Avin_34160 | Avin_39610 | Colicin V production protein. | Phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.607 |
purC | ACO79565.1 | Avin_35320 | Avin_34160 | SAICAR synthetase. | Colicin V production protein. | 0.880 |
purC | purD | Avin_35320 | Avin_06880 | SAICAR synthetase. | Phosphoribosylglycinamide synthetase; Belongs to the GARS family. | 0.997 |
purC | purE | Avin_35320 | Avin_01190 | SAICAR synthetase. | 1-(5-Phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.997 |
purC | purF | Avin_35320 | Avin_34150 | SAICAR synthetase. | Amidophosphoribosyl transferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.976 |
purC | purH | Avin_35320 | Avin_06890 | SAICAR synthetase. | Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.971 |
purC | purK | Avin_35320 | Avin_01200 | SAICAR synthetase. | Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.959 |
purC | purL | Avin_35320 | Avin_39660 | SAICAR synthetase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.999 |
purC | purM | Avin_35320 | Avin_36890 | SAICAR synthetase. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.963 |
purC | purN | Avin_35320 | Avin_36900 | SAICAR synthetase. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.967 |
purC | purT | Avin_35320 | Avin_39610 | SAICAR synthetase. | Phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.731 |
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