Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Asuc_0597 | Asuc_0932 | Asuc_0597 | Asuc_0932 | PFAM: Uncharacterized lipoprotein; KEGG: msu:MS0312 uncharacterized lipoprotein. | DNA polymerase III psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.774 |
| Asuc_0597 | Asuc_0999 | Asuc_0597 | Asuc_0999 | PFAM: Uncharacterized lipoprotein; KEGG: msu:MS0312 uncharacterized lipoprotein. | KEGG: msu:MS0837 TorD protein. | 0.773 |
| Asuc_0597 | ftsP | Asuc_0597 | Asuc_2072 | PFAM: Uncharacterized lipoprotein; KEGG: msu:MS0312 uncharacterized lipoprotein. | Multicopper oxidase type 3; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. | 0.573 |
| Asuc_0597 | matP | Asuc_0597 | Asuc_1445 | PFAM: Uncharacterized lipoprotein; KEGG: msu:MS0312 uncharacterized lipoprotein. | Protein of unknown function DUF1047; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. | 0.769 |
| Asuc_0597 | zapA | Asuc_0597 | Asuc_0659 | PFAM: Uncharacterized lipoprotein; KEGG: msu:MS0312 uncharacterized lipoprotein. | Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division (By similarity). | 0.773 |
| Asuc_0906 | ftsP | Asuc_0906 | Asuc_2072 | TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: bba:Bd2567 pseudoazurin. | Multicopper oxidase type 3; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. | 0.671 |
| Asuc_0932 | Asuc_0597 | Asuc_0932 | Asuc_0597 | DNA polymerase III psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | PFAM: Uncharacterized lipoprotein; KEGG: msu:MS0312 uncharacterized lipoprotein. | 0.774 |
| Asuc_0932 | Asuc_0999 | Asuc_0932 | Asuc_0999 | DNA polymerase III psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | KEGG: msu:MS0837 TorD protein. | 0.773 |
| Asuc_0932 | ftsP | Asuc_0932 | Asuc_2072 | DNA polymerase III psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Multicopper oxidase type 3; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. | 0.526 |
| Asuc_0932 | matP | Asuc_0932 | Asuc_1445 | DNA polymerase III psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Protein of unknown function DUF1047; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. | 0.737 |
| Asuc_0932 | zapA | Asuc_0932 | Asuc_0659 | DNA polymerase III psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division (By similarity). | 0.748 |
| Asuc_0999 | Asuc_0597 | Asuc_0999 | Asuc_0597 | KEGG: msu:MS0837 TorD protein. | PFAM: Uncharacterized lipoprotein; KEGG: msu:MS0312 uncharacterized lipoprotein. | 0.773 |
| Asuc_0999 | Asuc_0932 | Asuc_0999 | Asuc_0932 | KEGG: msu:MS0837 TorD protein. | DNA polymerase III psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. | 0.773 |
| Asuc_0999 | ftsP | Asuc_0999 | Asuc_2072 | KEGG: msu:MS0837 TorD protein. | Multicopper oxidase type 3; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. | 0.702 |
| Asuc_0999 | matP | Asuc_0999 | Asuc_1445 | KEGG: msu:MS0837 TorD protein. | Protein of unknown function DUF1047; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. | 0.773 |
| Asuc_0999 | zapA | Asuc_0999 | Asuc_0659 | KEGG: msu:MS0837 TorD protein. | Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division (By similarity). | 0.755 |
| Asuc_1034 | ftsP | Asuc_1034 | Asuc_2072 | TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: plu:plu3824 copper-transporting P-type ATPase. | Multicopper oxidase type 3; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. | 0.652 |
| Asuc_2071 | ftsP | Asuc_2071 | Asuc_2072 | TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: pmu:PM0103 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | Multicopper oxidase type 3; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. | 0.779 |
| Asuc_2071 | lpxH | Asuc_2071 | Asuc_2070 | TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: pmu:PM0103 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.572 |
| ftsP | Asuc_0597 | Asuc_2072 | Asuc_0597 | Multicopper oxidase type 3; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress. | PFAM: Uncharacterized lipoprotein; KEGG: msu:MS0312 uncharacterized lipoprotein. | 0.573 |
page 1 of 3