STRINGSTRING
tmcAL tmcAL ACQ70627.1 ACQ70627.1 polC polC ACQ70674.1 ACQ70674.1 ACQ71442.1 ACQ71442.1 ACQ71740.1 ACQ71740.1 rpmF rpmF ecfT ecfT ACQ69273.1 ACQ69273.1 trmB trmB ACQ71440.1 ACQ71440.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
tmcALProtein of unknown function DUF795; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. (376 aa)    
Predicted Functional Partners:
ACQ70627.1
PFAM: methyltransferase small; KEGG: bcb:BCB4264_A0039 hypothetical protein.
  
     0.708
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
    0.666
ACQ70674.1
Diguanylate cyclase and phosphoesterase; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
  
     0.631
ACQ71442.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bcr:BCAH187_A4462 hypothetical protein.
  
    0.610
ACQ71740.1
PFAM: protein of unknown function DUF177; KEGG: bcy:Bcer98_2574 hypothetical protein.
       0.577
rpmF
TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: bsu:BSU15080 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
       0.538
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
     0.500
ACQ69273.1
KEGG: mxa:MXAN_4322 thiopurine S-methyltransferase.
  
    0.495
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
   
 0.486
ACQ71440.1
Metal dependent phosphohydrolase; KEGG: bsu:BSU25630 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
 
  
 0.452
Your Current Organism:
Exiguobacterium sp. AT1b
NCBI taxonomy Id: 360911
Other names: E. sp. AT1b
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