node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fnod_0821 | Fnod_0834 | Fnod_0821 | Fnod_0834 | PFAM: flagellar protein FliS; KEGG: tpt:Tpet_1574 flagellar protein FliS. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.927 |
Fnod_0821 | Fnod_1531 | Fnod_0821 | Fnod_1531 | PFAM: flagellar protein FliS; KEGG: tpt:Tpet_1574 flagellar protein FliS. | CheC, inhibitor of MCP methylation; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: tpt:Tpet_0251 CheC, inhibitor of MCP methylation. | 0.999 |
Fnod_0821 | Fnod_1650 | Fnod_0821 | Fnod_1650 | PFAM: flagellar protein FliS; KEGG: tpt:Tpet_1574 flagellar protein FliS. | TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: tma:TM0082 flagellar hook-associated protein 3. | 0.972 |
Fnod_0821 | csrA | Fnod_0821 | Fnod_1511 | PFAM: flagellar protein FliS; KEGG: tpt:Tpet_1574 flagellar protein FliS. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.680 |
Fnod_0821 | fliW | Fnod_0821 | Fnod_1512 | PFAM: flagellar protein FliS; KEGG: tpt:Tpet_1574 flagellar protein FliS. | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.813 |
Fnod_0834 | Fnod_0821 | Fnod_0834 | Fnod_0821 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | PFAM: flagellar protein FliS; KEGG: tpt:Tpet_1574 flagellar protein FliS. | 0.927 |
Fnod_0834 | Fnod_1531 | Fnod_0834 | Fnod_1531 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | CheC, inhibitor of MCP methylation; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: tpt:Tpet_0251 CheC, inhibitor of MCP methylation. | 0.999 |
Fnod_0834 | Fnod_1650 | Fnod_0834 | Fnod_1650 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: tma:TM0082 flagellar hook-associated protein 3. | 0.816 |
Fnod_0834 | csrA | Fnod_0834 | Fnod_1511 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.635 |
Fnod_0834 | fliW | Fnod_0834 | Fnod_1512 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.590 |
Fnod_1509 | csrA | Fnod_1509 | Fnod_1511 | PFAM: protein of unknown function UPF0102; KEGG: tpt:Tpet_0671 protein of unknown function UPF0102; Belongs to the UPF0102 family. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.815 |
Fnod_1509 | deoC | Fnod_1509 | Fnod_1507 | PFAM: protein of unknown function UPF0102; KEGG: tpt:Tpet_0671 protein of unknown function UPF0102; Belongs to the UPF0102 family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.657 |
Fnod_1509 | fliW | Fnod_1509 | Fnod_1512 | PFAM: protein of unknown function UPF0102; KEGG: tpt:Tpet_0671 protein of unknown function UPF0102; Belongs to the UPF0102 family. | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.735 |
Fnod_1509 | gatC | Fnod_1509 | Fnod_1510 | PFAM: protein of unknown function UPF0102; KEGG: tpt:Tpet_0671 protein of unknown function UPF0102; Belongs to the UPF0102 family. | glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.801 |
Fnod_1509 | smpB | Fnod_1509 | Fnod_1508 | PFAM: protein of unknown function UPF0102; KEGG: tpt:Tpet_0671 protein of unknown function UPF0102; Belongs to the UPF0102 family. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.803 |
Fnod_1531 | Fnod_0821 | Fnod_1531 | Fnod_0821 | CheC, inhibitor of MCP methylation; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: tpt:Tpet_0251 CheC, inhibitor of MCP methylation. | PFAM: flagellar protein FliS; KEGG: tpt:Tpet_1574 flagellar protein FliS. | 0.999 |
Fnod_1531 | Fnod_0834 | Fnod_1531 | Fnod_0834 | CheC, inhibitor of MCP methylation; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: tpt:Tpet_0251 CheC, inhibitor of MCP methylation. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.999 |
Fnod_1531 | Fnod_1650 | Fnod_1531 | Fnod_1650 | CheC, inhibitor of MCP methylation; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: tpt:Tpet_0251 CheC, inhibitor of MCP methylation. | TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: tma:TM0082 flagellar hook-associated protein 3. | 0.936 |
Fnod_1531 | csrA | Fnod_1531 | Fnod_1511 | CheC, inhibitor of MCP methylation; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: tpt:Tpet_0251 CheC, inhibitor of MCP methylation. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.656 |
Fnod_1531 | fliW | Fnod_1531 | Fnod_1512 | CheC, inhibitor of MCP methylation; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: tpt:Tpet_0251 CheC, inhibitor of MCP methylation. | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.870 |