Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LVIS_1580 | rny1 | LVIS_1580 | LVIS_1235 | Superfamily II DNA and RNA helicase. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.532 |
| LVIS_1580 | rny2 | LVIS_1580 | LVIS_2112 | Superfamily II DNA and RNA helicase. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.532 |
| LVIS_1580 | rpsO | LVIS_1580 | LVIS_1392 | Superfamily II DNA and RNA helicase. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.462 |
| LVIS_2110 | LVIS_2111 | LVIS_2110 | LVIS_2111 | Aldo/keto reductase of diketogulonate reductase family. | Recombination protein MgsA. | 0.729 |
| LVIS_2110 | rny2 | LVIS_2110 | LVIS_2112 | Aldo/keto reductase of diketogulonate reductase family. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.495 |
| LVIS_2111 | LVIS_2110 | LVIS_2111 | LVIS_2110 | Recombination protein MgsA. | Aldo/keto reductase of diketogulonate reductase family. | 0.729 |
| LVIS_2111 | rny2 | LVIS_2111 | LVIS_2112 | Recombination protein MgsA. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.568 |
| LVIS_2113 | rny2 | LVIS_2113 | LVIS_2112 | Predicted membrane protein. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.507 |
| cshA | rny1 | LVIS_0505 | LVIS_1235 | Superfamily II DNA and RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.532 |
| cshA | rny2 | LVIS_0505 | LVIS_2112 | Superfamily II DNA and RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.532 |
| cshA | rpsO | LVIS_0505 | LVIS_1392 | Superfamily II DNA and RNA helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.462 |
| cshB | rny1 | LVIS_1224 | LVIS_1235 | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.593 |
| cshB | rny2 | LVIS_1224 | LVIS_2112 | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.532 |
| cshB | rpsO | LVIS_1224 | LVIS_1392 | Superfamily II DNA and RNA helicase; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.462 |
| rnj | rnj-2 | LVIS_1391 | LVIS_1414 | Predicted hydrolase of the metallo-beta-lactamase superfamily; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.909 |
| rnj | rny1 | LVIS_1391 | LVIS_1235 | Predicted hydrolase of the metallo-beta-lactamase superfamily; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.548 |
| rnj | rny2 | LVIS_1391 | LVIS_2112 | Predicted hydrolase of the metallo-beta-lactamase superfamily; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.548 |
| rnj | rpsO | LVIS_1391 | LVIS_1392 | Predicted hydrolase of the metallo-beta-lactamase superfamily; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.713 |
| rnj-2 | rnj | LVIS_1414 | LVIS_1391 | mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Predicted hydrolase of the metallo-beta-lactamase superfamily; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.909 |
| rnj-2 | rny1 | LVIS_1414 | LVIS_1235 | mRNA degradation ribonuclease J1/J2, metallo-beta-lactamase superfamily enzyme; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | Predicted membrane-associated HD superfamily hydrolase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.548 |
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