Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP26253.1 | ureE | NGR_c24960 | NGR_c24950 | Hypothetical protein. | Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.793 |
ACP26253.1 | ureF | NGR_c24960 | NGR_c24940 | Hypothetical protein. | Putative urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.800 |
ACP26253.1 | ureG | NGR_c24960 | NGR_c24930 | Hypothetical protein. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.646 |
guaB | ureG | NGR_c03770 | NGR_c24930 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.419 |
hupE | ureB | NGR_c23480 | NGR_c25030 | Protein HupE precursor. | Urease beta subunit UreB; Belongs to the urease beta subunit family. | 0.422 |
hupE | ureD | NGR_c23480 | NGR_c25060 | Protein HupE precursor. | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.432 |
hupE | ureE | NGR_c23480 | NGR_c24950 | Protein HupE precursor. | Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.435 |
hupE | ureF | NGR_c23480 | NGR_c24940 | Protein HupE precursor. | Putative urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.423 |
hupE | ureG | NGR_c23480 | NGR_c24930 | Protein HupE precursor. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.433 |
ureA | ureB | NGR_c25050 | NGR_c25030 | Urease subunit gamma UreA; Belongs to the urease gamma subunit family. | Urease beta subunit UreB; Belongs to the urease beta subunit family. | 0.999 |
ureA | ureC | NGR_c25050 | NGR_c25000 | Urease subunit gamma UreA; Belongs to the urease gamma subunit family. | Urease alpha subunit UreC; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.999 |
ureA | ureD | NGR_c25050 | NGR_c25060 | Urease subunit gamma UreA; Belongs to the urease gamma subunit family. | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.990 |
ureA | ureE | NGR_c25050 | NGR_c24950 | Urease subunit gamma UreA; Belongs to the urease gamma subunit family. | Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.959 |
ureA | ureF | NGR_c25050 | NGR_c24940 | Urease subunit gamma UreA; Belongs to the urease gamma subunit family. | Putative urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.972 |
ureA | ureG | NGR_c25050 | NGR_c24930 | Urease subunit gamma UreA; Belongs to the urease gamma subunit family. | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. | 0.968 |
ureB | hupE | NGR_c25030 | NGR_c23480 | Urease beta subunit UreB; Belongs to the urease beta subunit family. | Protein HupE precursor. | 0.422 |
ureB | ureA | NGR_c25030 | NGR_c25050 | Urease beta subunit UreB; Belongs to the urease beta subunit family. | Urease subunit gamma UreA; Belongs to the urease gamma subunit family. | 0.999 |
ureB | ureC | NGR_c25030 | NGR_c25000 | Urease beta subunit UreB; Belongs to the urease beta subunit family. | Urease alpha subunit UreC; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. | 0.999 |
ureB | ureD | NGR_c25030 | NGR_c25060 | Urease beta subunit UreB; Belongs to the urease beta subunit family. | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.992 |
ureB | ureE | NGR_c25030 | NGR_c24950 | Urease beta subunit UreB; Belongs to the urease beta subunit family. | Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. | 0.969 |
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