STRINGSTRING
astB astB Spea_3515 Spea_3515 astE astE argD argD Spea_1942 Spea_1942 astD astD topA topA Spea_3490 Spea_3490 Spea_3701 Spea_3701 Spea_1556 Spea_1556 Spea_3508 Spea_3508
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
astBSuccinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). (445 aa)    
Predicted Functional Partners:
Spea_3515
PFAM: arginine N-succinyltransferase beta subunit; KEGG: slo:Shew_0579 arginine N-succinyltransferase.
 
 
 0.997
astE
Succinylglutamate desuccinylase/aspartoacylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
 
  
 0.975
argD
TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: slo:Shew_0578 acetylornithine and succinylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 
 0.903
Spea_1942
PFAM: NAD-glutamate dehydrogenase; KEGG: slo:Shew_1809 NAD-glutamate dehydrogenase.
 
    0.859
astD
Aldehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
 
  
 0.811
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
 
     0.517
Spea_3490
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
   
 0.491
Spea_3701
KEGG: slo:Shew_0460 hypothetical protein.
  
   
 0.476
Spea_1556
KEGG: son:SO_2183 hypothetical protein.
      
 0.402
Spea_3508
PFAM: Sel1 domain protein repeat-containing protein; KEGG: sbl:Sbal_0579 Sel1 domain protein repeat-containing protein.
      
 0.402
Your Current Organism:
Shewanella pealeana
NCBI taxonomy Id: 398579
Other names: S. pealeana ATCC 700345, Shewanella pealeana ATCC 700345, Shewanella pealeana str. ATCC 700345, Shewanella pealeana strain ATCC 700345
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