node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Spro_0204 | rnb | Spro_0204 | Spro_2638 | Conserved hypothetical integral membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | 0.461 |
Spro_0289 | Spro_4292 | Spro_0289 | Spro_4292 | PFAM: protein of unknown function DUF416; KEGG: yen:YE0299 hypothetical protein. | SMART: SH3 domain protein; KEGG: ypi:YpsIP31758_0561 hypothetical protein. | 0.654 |
Spro_0289 | Spro_4329 | Spro_0289 | Spro_4329 | PFAM: protein of unknown function DUF416; KEGG: yen:YE0299 hypothetical protein. | KEGG: yen:YE3716 hypothetical protein. | 0.479 |
Spro_0289 | rnb | Spro_0289 | Spro_2638 | PFAM: protein of unknown function DUF416; KEGG: yen:YE0299 hypothetical protein. | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | 0.489 |
Spro_2637 | rnb | Spro_2637 | Spro_2638 | TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: yen:YE1983 putative oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | 0.498 |
Spro_2639 | rnb | Spro_2639 | Spro_2638 | PFAM: carbon starvation protein CstA; KEGG: yen:YE1981 putative carbon starvation protein A. | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | 0.416 |
Spro_4292 | Spro_0289 | Spro_4292 | Spro_0289 | SMART: SH3 domain protein; KEGG: ypi:YpsIP31758_0561 hypothetical protein. | PFAM: protein of unknown function DUF416; KEGG: yen:YE0299 hypothetical protein. | 0.654 |
Spro_4292 | Spro_4329 | Spro_4292 | Spro_4329 | SMART: SH3 domain protein; KEGG: ypi:YpsIP31758_0561 hypothetical protein. | KEGG: yen:YE3716 hypothetical protein. | 0.645 |
Spro_4292 | rnb | Spro_4292 | Spro_2638 | SMART: SH3 domain protein; KEGG: ypi:YpsIP31758_0561 hypothetical protein. | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | 0.429 |
Spro_4329 | Spro_0289 | Spro_4329 | Spro_0289 | KEGG: yen:YE3716 hypothetical protein. | PFAM: protein of unknown function DUF416; KEGG: yen:YE0299 hypothetical protein. | 0.479 |
Spro_4329 | Spro_4292 | Spro_4329 | Spro_4292 | KEGG: yen:YE3716 hypothetical protein. | SMART: SH3 domain protein; KEGG: ypi:YpsIP31758_0561 hypothetical protein. | 0.645 |
Spro_4329 | rnb | Spro_4329 | Spro_2638 | KEGG: yen:YE3716 hypothetical protein. | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | 0.508 |
rnb | Spro_0204 | Spro_2638 | Spro_0204 | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | Conserved hypothetical integral membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.461 |
rnb | Spro_0289 | Spro_2638 | Spro_0289 | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | PFAM: protein of unknown function DUF416; KEGG: yen:YE0299 hypothetical protein. | 0.489 |
rnb | Spro_2637 | Spro_2638 | Spro_2637 | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: yen:YE1983 putative oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.498 |
rnb | Spro_2639 | Spro_2638 | Spro_2639 | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | PFAM: carbon starvation protein CstA; KEGG: yen:YE1981 putative carbon starvation protein A. | 0.416 |
rnb | Spro_4292 | Spro_2638 | Spro_4292 | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | SMART: SH3 domain protein; KEGG: ypi:YpsIP31758_0561 hypothetical protein. | 0.429 |
rnb | Spro_4329 | Spro_2638 | Spro_4329 | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | KEGG: yen:YE3716 hypothetical protein. | 0.508 |
rnb | rnd | Spro_2638 | Spro_2759 | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.568 |
rnb | rne | Spro_2638 | Spro_1898 | Exoribonuclease II; Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction. | Ribonuclease, Rne/Rng family; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.590 |