STRINGSTRING
metAS metAS Ssed_3283 Ssed_3283 Ssed_1175 Ssed_1175 Ssed_4040 Ssed_4040 Ssed_4041 Ssed_4041 Ssed_3739 Ssed_3739 Ssed_4039 Ssed_4039 hisI hisI Ssed_3727 Ssed_3727 rpmE rpmE ilvA ilvA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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metASHomoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family. (314 aa)    
Predicted Functional Partners:
Ssed_3283
KEGG: shw:Sputw3181_3244 O-acetylhomoserine/O-acetylserine sulfhydrylase.
 
 
 0.989
Ssed_1175
Aspartate kinase., Homoserine dehydrogenase; KEGG: slo:Shew_1079 aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family.
 
 0.975
Ssed_4040
Aspartate kinase., Homoserine dehydrogenase; KEGG: slo:Shew_0521 aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family.
 
 
 0.975
Ssed_4041
Cystathionine gamma-synthase; KEGG: shn:Shewana3_3614 O-succinylhomoserine (thiol)-lyase.
 
 
 0.974
Ssed_3739
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.918
Ssed_4039
KEGG: slo:Shew_0522 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
  
 0.915
hisI
KEGG: slo:Shew_2204 phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
 
    0.886
Ssed_3727
KEGG: aha:AHA_1691 NADH dehydrogenase.
   
    0.863
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
   
    0.849
ilvA
Threonine dehydratase, biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
   
 
 0.844
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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