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hldE hldE Ssed_1783 Ssed_1783 gmhA gmhA Ssed_0109 Ssed_0109 lpxL lpxL Ssed_3811 Ssed_3811 Ssed_0934 Ssed_0934 Ssed_0731 Ssed_0731 Ssed_0104 Ssed_0104 lpxB lpxB hisB hisB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
hldERfaE bifunctional protein; Catalyzes the phosphorylation of D-glycero-D-manno-heptose 7- phosphate at the C-1 position to selectively form D-glycero-beta-D- manno-heptose-1,7-bisphosphate; In the C-terminal section; belongs to the cytidylyltransferase family. (476 aa)    
Predicted Functional Partners:
Ssed_1783
KEGG: slo:Shew_2357 D,D-heptose 1,7-bisphosphate phosphatase.
  
 0.985
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
   
 0.974
Ssed_0109
KEGG: slo:Shew_3702 glycosyl transferase, family 9.
 
  
 0.821
lpxL
Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).
 
   
 0.674
Ssed_3811
KEGG: son:SO3744 hypothetical protein.
       0.631
Ssed_0934
KEGG: slo:Shew_0847 Rh family protein/ammonium transporter.
      
 0.537
Ssed_0731
Arabinose-5-phosphate isomerase; KEGG: slo:Shew_3306 KpsF/GutQ family protein.
 
   
 0.536
Ssed_0104
three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
 
   
 0.507
lpxB
Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
   
 0.502
hisB
KEGG: slo:Shew_2200 histidinol-phosphatase; In the N-terminal section; belongs to the histidinol- phosphatase family.
  
  
 0.499
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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