STRINGSTRING
uxaC uxaC mtlK mtlK kduI kduI kduD kduD PHZ_c2457 PHZ_c2457 xynB xynB xylB xylB PHZ_c2476 PHZ_c2476 mhpD mhpD PHZ_c2454 PHZ_c2454 kdgK kdgK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCGlucuronate isomerase. (480 aa)    
Predicted Functional Partners:
mtlK
Mannitol 2-dehydrogenase.
 
 
 0.990
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
 0.954
kduD
2-deoxy-D-gluconate 3-dehydrogenase.
 
   
 0.908
PHZ_c2457
Altronate hydrolase.
  
 0.885
xynB
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
    
 0.817
xylB
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
    
 0.817
PHZ_c2476
Mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.695
mhpD
2-keto-4-pentenoate hydratase.
 
     0.623
PHZ_c2454
Major facilitator family transporter.
 
   
 0.596
kdgK
2-dehydro-3-deoxygluconokinase.
 
   
 0.568
Your Current Organism:
Phenylobacterium zucineum
NCBI taxonomy Id: 450851
Other names: P. zucineum HLK1, Phenylobacterium zucineum HLK1, Phenylobacterium zucineum str. HLK1, Phenylobacterium zucineum strain HLK1
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