STRINGSTRING
lspA lspA secD secD Aasi_1325 Aasi_1325 Aasi_0016 Aasi_0016 Aasi_1160 Aasi_1160 Aasi_0999 Aasi_0999 Aasi_1629 Aasi_1629 Aasi_0017 Aasi_0017 ileS ileS Aasi_1645 Aasi_1645 lpxC lpxC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
lspALipoprotein signal peptidase-like protein; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (236 aa)    
Predicted Functional Partners:
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
     
 0.874
Aasi_1325
Hypothetical protein; PFAM: PF01609, Transposase, IS4-like.
 
  
 0.745
Aasi_0016
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; PRINTS: PR00419, Adrenodoxin reductase;PR00469, Pyridine nucleotide-disulphide oxidoreductase, class-II;PR00368, FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PROSITE: PS00573, Pyridine nucleotide-disulphide oxidoreductase, class-II, active site; PFAM: PF00070, Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region;PF07992, FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRODOM: PD000139, Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; TIGRFAMS: TIGR01292, Thioredo [...]
   
 
 0.705
Aasi_1160
Hypothetical protein; PROSITE: PS01150, NADH dehydrogenase (ubiquinone), 20 kDa subunit; PANTHER: PTHR11995:SF2, NADH dehydrogenase (ubiquinone), 20 kDa subunit;PTHR11995, [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB; PFAM: PF01058, NADH ubiquinone oxidoreductase, 20 kDa subunit; TIGRFAMS: TIGR01957, NADH dehydrogenase (ubiquinone), 20 kDa subunit.
  
  
 0.675
Aasi_0999
Hypothetical protein; PFAM: PF01609, Transposase, IS4-like.
  
  
 0.626
Aasi_1629
Hypothetical protein.
  
  
 0.626
Aasi_0017
Aminotransferase class V; PRINTS: PR00509, Alpha-D-phosphohexomutase, N-terminal; PROSITE: PS00710, Alpha-D-phosphohexomutase, conserved site; SUPERFAMILY: SSF53738, Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III; PFAM: PF02880, Alpha-D-phosphohexomutase, alpha/beta/alpha domain III;PF02879, Alpha-D-phosphohexomutase, alpha/beta/alpha domain II;PF02878, Alpha-D-phosphohexomutase, alpha/beta/alpha domain I;PF00408, Alpha-D-phosphohexomutase, C-terminal; GENE3D: G3DSA:3.40.120.10, Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III.
       0.617
ileS
Hypothetical protein; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
  
  
 0.600
Aasi_1645
Hypothetical protein.
 
   
 0.511
lpxC
Hypothetical protein; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
   
  
 0.493
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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