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proS proS rpl30e rpl30e rpl23 rpl23 rpl18 rpl18 rpl6 rpl6 rpl21e rpl21e Mboo_0549 Mboo_0549 rpl31e rpl31e rpl24e rpl24e rps9 rps9 Mboo_2220 Mboo_2220
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
proSprolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). (478 aa)    
Predicted Functional Partners:
rpl30e
PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: mhu:Mhun_0054 ribosomal protein L7Ae/L30e/S12e/Gadd45; Belongs to the eukaryotic ribosomal protein eL30 family.
  
 0.986
rpl23
Ribosomal protein L25/L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.
  
 0.984
rpl18
Ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
 
 0.984
rpl6
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
  
 0.981
rpl21e
PFAM: ribosomal protein L21e; KEGG: mhu:Mhun_3026 ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.
   
 0.981
Mboo_0549
PFAM: Ribosomal protein L32e; KEGG: mhu:Mhun_2236 ribosomal protein L32e.
 
 0.980
rpl31e
PFAM: Ribosomal protein L31e; KEGG: mhu:Mhun_3019 ribosomal protein L31e; Belongs to the eukaryotic ribosomal protein eL31 family.
   
 0.980
rpl24e
Ribosomal protein L24E; Binds to the 23S rRNA.
  
 0.979
rps9
PFAM: ribosomal protein S9; KEGG: mhu:Mhun_2896 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
 
 0.979
Mboo_2220
TIGRFAM: ribosomal protein L13; KEGG: mhu:Mhun_2897 ribosomal protein L13.
  
 0.979
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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