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hspQ hspQ ymoA ymoA holE holE lpp lpp yciC yciC wzyE wzyE rlmI rlmI yrbK yrbK wecF wecF yecF yecF cpxP cpxP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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hspQConserved hypothetical protein; Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress; Belongs to the HspQ family. (105 aa)    
Predicted Functional Partners:
ymoA
Putative YmoA, negative regulator of invasin expression; silverDB:etchr02477.
  
     0.704
holE
DNA polymerase III theta subunit; silverDB:etchr01495.
  
     0.697
lpp
Major outer membrane lipoprotein precursor (Murein-lipoprotein); silverDB:etchr01803.
  
     0.660
yciC
Conserved hypothetical protein YciC; silverDB:etchr01586.
  
     0.602
wzyE
Putative ECA polymerase; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.
  
     0.588
rlmI
SAM-dependent methyltransferase; Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA.
       0.588
yrbK
Possible exported protein YrbK; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
  
     0.537
wecF
4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.
  
     0.522
yecF
Conserved hypothetical protein YecF; silverDB:etchr02067.
  
     0.522
cpxP
Periplasmic repressor of cpx regulon by interaction with CpxA; silverDB:etchr00095.
  
     0.478
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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