STRINGSTRING
ybjL ybjL yhfK yhfK ypfN ypfN ybjG ybjG ETA_15890 ETA_15890 ETA_21830 ETA_21830 pmfF pmfF csuC csuC ETA_21030 ETA_21030 grxA grxA ETA_02590 ETA_02590
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybjLPutative transport protein YbjL; silverDB:etchr02170. (562 aa)    
Predicted Functional Partners:
yhfK
Putative inner membrane protein YhfK; silverDB:etchr03177.
  
     0.572
ypfN
Conserved hypothetical protein YpfN; silverDB:etchr01062.
  
     0.505
ybjG
Putative permease YbjG; silverDB:etchr02172.
 
    0.501
ETA_15890
Conserved hypothetical protein; silverDB:etchr01579; Belongs to the UPF0263 family.
  
     0.465
ETA_21830
Putative phosphoesterase; silverDB:etchr02171.
       0.457
pmfF
Putative minor fimbrial subunit PmfF; silverDB:etchr03004.
  
     0.452
csuC
CsuC protein, similar to fimbrial chaperone proteins (chaperone-usher pili assembly system); silverDB:etchr00456.
  
     0.451
ETA_21030
Outer membrane protein A; silverDB:etchr02091; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
    0.441
grxA
silverDB:etchr02169.
       0.424
ETA_02590
Major MR/P fimbria protein; silverDB:etchr00258.
  
     0.419
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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