Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Phep_1128 | Phep_2833 | Phep_1128 | Phep_2833 | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | Hypothetical protein. | 0.671 |
Phep_1128 | Phep_2892 | Phep_1128 | Phep_2892 | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | 0.642 |
Phep_1128 | Phep_4045 | Phep_1128 | Phep_4045 | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | Methyltransferase type 12; PFAM: Methyltransferase domain. | 0.424 |
Phep_1128 | hepC | Phep_1128 | Phep_3797 | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | Heparinase II/III family protein; Specifically cleaves heparan sulfate-rich regions of acidic polysaccharides. Does not act on N,O-desulfated glucosamine or N- acetyl-O-sulfated glucosamine linkages. Functions in cleaving metazoan heparan sulfate and providing carbon, nitrogen and sulfate sources for microorganisms; Belongs to the polysaccharide lyase 12 family. | 0.457 |
Phep_2654 | hepC | Phep_2654 | Phep_3797 | Hypothetical protein. | Heparinase II/III family protein; Specifically cleaves heparan sulfate-rich regions of acidic polysaccharides. Does not act on N,O-desulfated glucosamine or N- acetyl-O-sulfated glucosamine linkages. Functions in cleaving metazoan heparan sulfate and providing carbon, nitrogen and sulfate sources for microorganisms; Belongs to the polysaccharide lyase 12 family. | 0.466 |
Phep_2830 | hepB | Phep_2830 | Phep_2408 | PFAM: Glycosyl Hydrolase Family 88. | Heparinase II/III family protein; Cleaves both heparin and heparan sulfate glycosaminoglycans through a beta-elimination mechanism. Cleaves heparin at alpha-D- GlcNp2S6S(1->4) alpha-L-IdoAp2S and heparan sulfate at alpha-D- GlcNp2Ac(or 2S)6OH(1->4)beta-D-GlcAp. | 0.499 |
Phep_2830 | hepC | Phep_2830 | Phep_3797 | PFAM: Glycosyl Hydrolase Family 88. | Heparinase II/III family protein; Specifically cleaves heparan sulfate-rich regions of acidic polysaccharides. Does not act on N,O-desulfated glucosamine or N- acetyl-O-sulfated glucosamine linkages. Functions in cleaving metazoan heparan sulfate and providing carbon, nitrogen and sulfate sources for microorganisms; Belongs to the polysaccharide lyase 12 family. | 0.593 |
Phep_2833 | Phep_1128 | Phep_2833 | Phep_1128 | Hypothetical protein. | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | 0.671 |
Phep_2833 | Phep_2892 | Phep_2833 | Phep_2892 | Hypothetical protein. | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | 0.639 |
Phep_2833 | Phep_3398 | Phep_2833 | Phep_3398 | Hypothetical protein. | Hypothetical protein. | 0.469 |
Phep_2833 | Phep_4045 | Phep_2833 | Phep_4045 | Hypothetical protein. | Methyltransferase type 12; PFAM: Methyltransferase domain. | 0.624 |
Phep_2833 | hepB | Phep_2833 | Phep_2408 | Hypothetical protein. | Heparinase II/III family protein; Cleaves both heparin and heparan sulfate glycosaminoglycans through a beta-elimination mechanism. Cleaves heparin at alpha-D- GlcNp2S6S(1->4) alpha-L-IdoAp2S and heparan sulfate at alpha-D- GlcNp2Ac(or 2S)6OH(1->4)beta-D-GlcAp. | 0.698 |
Phep_2833 | hepC | Phep_2833 | Phep_3797 | Hypothetical protein. | Heparinase II/III family protein; Specifically cleaves heparan sulfate-rich regions of acidic polysaccharides. Does not act on N,O-desulfated glucosamine or N- acetyl-O-sulfated glucosamine linkages. Functions in cleaving metazoan heparan sulfate and providing carbon, nitrogen and sulfate sources for microorganisms; Belongs to the polysaccharide lyase 12 family. | 0.713 |
Phep_2892 | Phep_1128 | Phep_2892 | Phep_1128 | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | 0.642 |
Phep_2892 | Phep_2833 | Phep_2892 | Phep_2833 | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | Hypothetical protein. | 0.639 |
Phep_2892 | hepC | Phep_2892 | Phep_3797 | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | Heparinase II/III family protein; Specifically cleaves heparan sulfate-rich regions of acidic polysaccharides. Does not act on N,O-desulfated glucosamine or N- acetyl-O-sulfated glucosamine linkages. Functions in cleaving metazoan heparan sulfate and providing carbon, nitrogen and sulfate sources for microorganisms; Belongs to the polysaccharide lyase 12 family. | 0.491 |
Phep_3372 | hepC | Phep_3372 | Phep_3797 | RagB/SusD domain protein; PFAM: RagB, SusD and hypothetical proteins. | Heparinase II/III family protein; Specifically cleaves heparan sulfate-rich regions of acidic polysaccharides. Does not act on N,O-desulfated glucosamine or N- acetyl-O-sulfated glucosamine linkages. Functions in cleaving metazoan heparan sulfate and providing carbon, nitrogen and sulfate sources for microorganisms; Belongs to the polysaccharide lyase 12 family. | 0.521 |
Phep_3398 | Phep_2833 | Phep_3398 | Phep_2833 | Hypothetical protein. | Hypothetical protein. | 0.469 |
Phep_3398 | Phep_4045 | Phep_3398 | Phep_4045 | Hypothetical protein. | Methyltransferase type 12; PFAM: Methyltransferase domain. | 0.640 |
Phep_3398 | hepB | Phep_3398 | Phep_2408 | Hypothetical protein. | Heparinase II/III family protein; Cleaves both heparin and heparan sulfate glycosaminoglycans through a beta-elimination mechanism. Cleaves heparin at alpha-D- GlcNp2S6S(1->4) alpha-L-IdoAp2S and heparan sulfate at alpha-D- GlcNp2Ac(or 2S)6OH(1->4)beta-D-GlcAp. | 0.474 |
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