STRINGSTRING
yccU yccU metB metB metC metC msrB msrB hspQ hspQ yigF yigF ynfD ynfD yccT yccT yihD yihD yeeX yeeX ygiN ygiN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
yccUPutative CoA-binding protein. (137 aa)    
Predicted Functional Partners:
metB
Cystathionine gamma-synthase, PLP-dependent; Catalyzes the formation of L-cystathionine from O-succinyl-L- homoserine (OSHS) and L-cysteine, via a gamma-replacement reaction. In the absence of thiol, catalyzes gamma-elimination to form 2- oxobutanoate, succinate and ammonia.
 
      0.899
metC
Cystathionine beta-lyase, PLP-dependent; Primarily catalyzes the cleavage of cystathionine to homocysteine, pyruvate and ammonia during methionine biosynthesis. Also exhibits cysteine desulfhydrase activity, producing sulfide from cysteine. In addition, under certain growth conditions, exhibits significant alanine racemase coactivity.
 
      0.889
msrB
Methionine sulfoxide reductase B.
 
 
    0.720
hspQ
Heat shock protein involved in degradation of mutant DnaA; Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress.
   
  
 0.662
yigF
DUF2628 family putative inner membrane protein.
      
 0.623
ynfD
DUF1161 family periplasmic protein.
   
  
 0.611
yccT
UPF0319 family protein; Belongs to the UPF0319 family.
  
    0.543
yihD
DUF1040 protein YihD; To H.influenzae HI_0845.
      
 0.530
yeeX
UPF0265 protein YeeX; Pseudogene, CP4-44 putative prophage remnant;Phage or Prophage Related; Belongs to the UPF0265 family.
      
 0.522
ygiN
Quinol monooxygenase; Can oxidize menadiol to menadione.
   
  
 0.476
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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