rpmH protein (Deinococcus deserti) - STRING interaction network

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Score

rpmH

Putative 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (47 aa)

Predicted Functional Partners:

rplU

0.994

rpmF

0.992

rplM

0.991

rpmI

0.986

rplS

0.986

rpsL

0.985

rpmJ

0.983

rpsT

0.982

rplT

0.981

rpmA

0.981

Your Current Organism:

Deinococcus deserti

NCBI taxonomy Id: 546414
Other names: D. deserti VCD115, Deinococcus deserti VCD115, Deinococcus deserti str. VCD115, Deinococcus deserti strain VCD115

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplS	Deide_07320	Deide_07240	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.997
rplM	rplT	Deide_07320	Deide_05920	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.998
rplM	rplU	Deide_07320	Deide_22180	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplM	rpmA	Deide_07320	Deide_22190	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.997
rplM	rpmF	Deide_07320	Deide_01330	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplM	rpmH	Deide_07320	Deide_03870	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.991
rplM	rpmI	Deide_07320	Deide_05910	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.996
rplM	rpmJ	Deide_07320	Deide_18670	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.996
rplM	rpsL	Deide_07320	Deide_19010	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.997
rplM	rpsT	Deide_07320	Deide_12360	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.996
rplS	rplM	Deide_07240	Deide_07320	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Putative 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplS	rplT	Deide_07240	Deide_05920	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Putative 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.997
rplS	rplU	Deide_07240	Deide_22180	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Putative 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplS	rpmA	Deide_07240	Deide_22190	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Putative 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplS	rpmF	Deide_07240	Deide_01330	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Putative 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplS	rpmH	Deide_07240	Deide_03870	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Putative 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.986
rplS	rpmI	Deide_07240	Deide_05910	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Putative 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.996
rplS	rpmJ	Deide_07240	Deide_18670	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Putative 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.992
rplS	rpsL	Deide_07240	Deide_19010	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Putative 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.996
rplS	rpsT	Deide_07240	Deide_12360	Putative 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Putative 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.986