Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACR16907.1 | ACR18540.1 | ckrop_0110 | ckrop_1820 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Putative non-ribosomal peptide synthetase component. | 0.757 |
| ACR16907.1 | dnaJ2 | ckrop_0110 | ckrop_1324 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Molecular chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...] | 0.687 |
| ACR16907.1 | ybeY | ckrop_0110 | ckrop_1321 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.844 |
| ACR17081.1 | ACR18540.1 | ckrop_0298 | ckrop_1820 | Glycine cleavage system P protein; Belongs to the GcvP family. | Putative non-ribosomal peptide synthetase component. | 0.418 |
| ACR17081.1 | ybeY | ckrop_0298 | ckrop_1321 | Glycine cleavage system P protein; Belongs to the GcvP family. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.766 |
| ACR17768.1 | ybeY | ckrop_1015 | ckrop_1321 | Conserved hypothetical protein; Predicted metalloprotease. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.795 |
| ACR18064.1 | ACR18066.1 | ckrop_1320 | ckrop_1322 | Transporter of the HlyC/CorC family. | Putative PhoH-related protein. | 0.844 |
| ACR18064.1 | dnaJ2 | ckrop_1320 | ckrop_1324 | Transporter of the HlyC/CorC family. | Molecular chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...] | 0.692 |
| ACR18064.1 | era | ckrop_1320 | ckrop_1319 | Transporter of the HlyC/CorC family. | Putative GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.717 |
| ACR18064.1 | ybeY | ckrop_1320 | ckrop_1321 | Transporter of the HlyC/CorC family. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.867 |
| ACR18066.1 | ACR18064.1 | ckrop_1322 | ckrop_1320 | Putative PhoH-related protein. | Transporter of the HlyC/CorC family. | 0.844 |
| ACR18066.1 | dnaJ2 | ckrop_1322 | ckrop_1324 | Putative PhoH-related protein. | Molecular chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...] | 0.637 |
| ACR18066.1 | era | ckrop_1322 | ckrop_1319 | Putative PhoH-related protein. | Putative GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.822 |
| ACR18066.1 | ybeY | ckrop_1322 | ckrop_1321 | Putative PhoH-related protein. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.968 |
| ACR18540.1 | ACR16907.1 | ckrop_1820 | ckrop_0110 | Putative non-ribosomal peptide synthetase component. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.757 |
| ACR18540.1 | ACR17081.1 | ckrop_1820 | ckrop_0298 | Putative non-ribosomal peptide synthetase component. | Glycine cleavage system P protein; Belongs to the GcvP family. | 0.418 |
| ACR18540.1 | dnaJ2 | ckrop_1820 | ckrop_1324 | Putative non-ribosomal peptide synthetase component. | Molecular chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...] | 0.934 |
| ACR18540.1 | era | ckrop_1820 | ckrop_1319 | Putative non-ribosomal peptide synthetase component. | Putative GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.414 |
| ACR18540.1 | ybeY | ckrop_1820 | ckrop_1321 | Putative non-ribosomal peptide synthetase component. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.909 |
| dnaJ2 | ACR16907.1 | ckrop_1324 | ckrop_0110 | Molecular chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dn [...] | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.687 |
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